Detail



ID : Ahg941877

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|941877|scaffold_602421.1
Sequence
ATCACTAGTT CGATACAAAG ATGTCATGGA TGAAAGGTAA ATCATCTGGT TGGACTGCGT TTGATCTCAA GCAGAGACAG AAACAAGGTC TTGAAAGCGT GGTCAAAGAT GATGATCCAT TCCCACCTGT CTCAACTAGT GTTAATGCAT CCTTAGGTGT AAGAGGAAAG TTGAGAAGAG ACCATGAACC TTCTGAAAAG TCTTTTTCGT CCGTGCTCTT ACCTCCTTTG AGATTTCCCG CATTGACAGA GAATAAAGAT TGCGGAAACG AAGAACGAGG TGGAGGTTGT AAGAGAAAAC CGAGCGCTTC GATTCTGCCG GTAAACAGTC ATGATTCAGC CTTCATGAAG CTGAAGGAAA TGAACAGCTG GGCGGATGAT AACTTGATAA GGGATGTATT GTTATCCACC GAAGATAATT TTGAGATGGC CTTAGATTTT TTGAAAGGAA TGGTTTCTTC TAGTAAGGAA GCTGAGGAGC CAACTTCTAA GATTGAGGGT TATTCATCCG ATAACAGAAG ATCCGAATAT AAAACATTTG GGAAAACTGT TACAAGTTCA GTGAAGATGG CTGCAAGGTC CACATGTGAG GATGCTGGCA AGTACGATTT GCAAGAGAGT GATGGAAGTT TGCCTCTGGT GAATGCATCT GACAGTGAAA AGTTCTCTGA TGATATCTCT GAACTAGATA GTATCATTCA GCGGCTTCAG TCCATTCCTA TAGAACCTGA ATGGGAAGAA GATGATCTCT ACTTGAGTCA TCGAAAGGAT GCACTGAAAA TGATGAGATC AGCCGCAAAC CATTCAAGAG CTGCCCAAAA TGCTTTTCAG AGATATGATC ATGCTTCTGC CAAGCAGCAT TCAGAGAAAG CAAGAGAGGA CTGGTTAACA GCTGAGAAGC TAAATGCTGA GGCGGCCAAG AAGATCATAG GTATAACAAA TAAGGATAAC GACATATGGA AGTTGGACCT GCATGGTCTC CATGCAACAG AAGCTGTCCA AGCGTTACAA GAACGTTTGC AAAAGATCGA AGGTCACTTC ACTGTGAACC GTTCAGTATC ACCAAATAGA GGTAGGTCGA AGAATGCAGC TCTGCGATCT GCATCACAAG AGCCTTTTGG TAGATTAGAT GTGGAAGGCA TGCACTGTCA AAGAACTTCT TCTAGGGAAC TACGAAACTC ATTGCAGGTT GTAACAGGTA TTGGTAAACA CAGTCGCGGA CATGCTTCAC TTCCTCTAGC CGTGAAGACA TTCTTTGAAG ATAACAGGTA TAGGTTTGAC GAGACAAGGC CAGGAGTTAT CACAGTTCGG CCTAAATTCC GACACTGCTG AAACTTTGAT TGATCTCAAG C 
Length1351
Protein Sequence
Protein Residue
Map Locationscaffold_6: 9563754.. 9565531
Download Sequence
A.thaliana
AGI-codeAT5G23520.1
Descriptionsmr (Small MutS Related) domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
20.567 Ahg492421 MAC/Perforin domain-containing protein
25.807 Ahg318610 CCAAT-displacement protein alternatively spliced product
33.6749 Ahg926633 cinnamyl-alcohol dehydrogenase
45.607 Ahg492703 DNA-directed RNA polymerase family protein
46.5833 Ahg482800 Arabidopsis Inositol phosphorylceramide synthase 2
46.7654 Ahg491758
49.4267 Ahg906831 chromatin remodeling 8
50.3984 Ahg488313 Protein kinase superfamily protein
51.614 Ahg495042 exocyst complex component 84B
52.4881 Ahg471723 CASC3/Barentsz eIF4AIII binding
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression