Detail



ID : Ahg942919

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|942919|scaffold_603463.1
Sequence
ATGAACCTGA TACATCACCA ATGGAAACAC AACCTGATAC CTCACCAGTG GAGACAAGAA AGTCCCTGGA TATTTCTGAG AAGACAAATA GCGGATGCTC AGCAGAGGCT GTTTACTCTG GAAACTTTTC AGTTACAGTA GCTGATGAAG GCGAGACAGC TCTTGTTGTA TCAATAGTCA AAGGAGACAA GTCTCATATG GAACCAAGTG ATACCAACCC ATTGCCAGTT GAAGCTAAAA TGGATGGAGA CCCAGATAGT TCGCATCTGA AAATTCTGTG TAGGGAGGAA AATACAGAAC AGGTCCCAGT AAAATCGGAG CTCAAGCAGT CCTTACCACA TGATATATCA TCAAGACTAT CTTCTGATTC ATATCAACCA TTTTTTGCTG CAGACATGGA GAATAGAGCA GACCCTGTTG TAGAGAAGGA CTGTCTGTCA GTAGATGATA AAAATGATCT TTCCACTACA GCCATTTCCA ATTCAGATGT TCCTAGTGTT GTCAGCTTAA AGAGAAAGTA TTCAGATTGC AGTGGGGATG ATGGCAATTC AGAAACTAAA CCTGAGATTT ACAAAGCTCT CAATAAACCA AAACTGGAGG AAGAGGAAGA ATTAGCTACC TTTCACCACG AGAGCAGATC CCCTTCAAAC AATACAACTG TTGATATATT CAGCATTGTC AAAGGAACTG GGCGTAGAAA AAATCTCATG CGTTCAAATC CTACTGATAA GTCTTCAGAA GGAGAGAATG CTGCTGGTTT GAGGGTAAAG AAGATCAAGA GGACACCGGA GGACGAGCAA GAGTCAATTG TTCTGGTTGA GAAACTAAGG AAAGAAATAA GAGAAGCCGT ACGTAACAAA TCGATGGAGG ACATCACAGA AAACCAATTC GATCCAAAAC TTTTGGCCGC CTTTAGAGCT GCTGTGGCAG GACCTAAAAC TGATGAAGCA CCTAGAAATA TTTCGGCTCT GGCAGTGAAG GCAAAGAAGT TGATGCTGCA AAAAGGAAAA GTCAGAGAGA ATCTGACCAA GAAAATTTAT GCAGATTTAA ATGGGAAGCG GAAGAGTGCA TGGCACCGGG ACTGTGAAGT TGAGTTTTGG AAGCATCGGT GCATACAAAG TAGAAAGCCT GAAAAAATTG AAACTCTGAA GTCTGTTCTT AGCCTCTTGA AGAAGAAACC AGGTGATGCC AAAACAAACT TTTCATCTGA AACCCCACAG GCCTCAAATC CTATCCTCTC CAGATTGTAT TTGGCAGATA CCTCCGTGTT CCCGAGAAAT GATAATCTCA AGCCTCTGTT GGCACCAAAA GAAACGGGAA ACTCACAAAA CAATGCAAAA CCCACAGAAG CCAACAAAAC TTTACCAAAG ATTAGTGATG CCAAGGGGAG CAGGTTAAAA GCTGCTGGAT CAAAACTGAA CTCAGGAAAC AAACAGTCGG ATGGGCAACC TAATCTTACA TCGAGTAATT CTAAGGAAAT GTTTGACATT CCTGACGATC TCAAGAAAGA CAAAAGGAAA TGGGCATTGC AGGTTCTTGC AAGAAAGAAA GCTTTAGCTG GCAACAACTC AACCCAAGAT AGAGAAGGCT CTCCCGAGCT CAAAGGGAAT TATCCATTGT TGGCTCAACT TCCAGCTGAT ATGAGACCAA GCCTTGCAAC CAGTCGCCAT AATAAAGTTC CTGTTGCAGT TAGACAGACA CAATTATATC GCCTGACAGA ACATTTCTTA AAGAAAGAAA ACCTTCTGTC TGTTCGAAGA AGTGCAGCAA CAGAACTAGC CGTTGCTGAT GCTATAAATA TCGAGAAAGC GATCGCTGAC AAATCAAGTA GCAAAGTTGT GTATCTGAAT CTATGCTCAC AAGAAATACT GCATCATTCA GAGAGCAAAG CGATGGATAA TGCTGTAGAA CCGAATTCGT CATCACCAAT GGCTGTTAAC GAGACAGAAC GTATTAGTGG TAAAGATTCA GATGATCCCG CCGTCCTTGA AGCGCTCAGA GCAGCAGGTC TTGCTGATTC ACCACCAAAC AGCCCAACCC GTTCAACAGA AGTTCCTCCA GAGAAAGGAG ACAGTTTCTT GGACAAAGCA AGGGCAGGCC CAGATAATGT ACTTGACTTA GATTCCGTTC CTGATACAGA CATCTTTGGG GATTTTGAGT ATGAATTGGA TGAAGGAGAT TATATGGGTG CTACCATGAC TACAAAAGCT TCAGTAACGC AGCCGGATGA AAGCCTGACT AAGGTGAAGG TAGTTTTATC CACTGTTCAA CCTGGAAAGT CTTTGAATCA ATCTGAAGTC GTGGGTGATG AAGAGACAAC AACTGAAAAC CAGAAGGAGA TCACAAATGG CAAAGAAGAT GGAAAGAGCT TTGTTCCTAT GGAGCCTGTA CCCGAGGCCG AGGGTGAAGG AGAAGGAGAA GGAGAAGGAG AAGGAGAAGG AGGAGGTGAG ATCCTTTCTG TAGCTGAATG TGAAGAACTA TACGGACCTG GTACAGAGAA ACTAGTTGAG AAACCTCTCA TTGAAGGATT TGATGAGAAT GGTGTTAAAG CTAAAGCACC TGATTCAGAG TGCGAGAGCC ACACACACAG AGAGTTCATC GCTTCAAACT TTGAAATCCC TTCCATTCAA GAGAAAAAAC TTCCCAGAAG CATTCAAAAG TGCAAACCAA GCGAAAAGCA GTCTAAAGAG GAAAAAGGCA AAGCTGATGG GTTTGGTAAC TCCATCACCA AGAAGGTGGA AATATACATC AAAGAACATA TCAGACCACT GTGCAAGAGC GGAGTGATAA ACGTGGAACA ATACAGATGG GCAGTGACGA AAACCACAGA GAAAGTGATG AAGTATCATA GCAAAGCCAA GAGTGCTAAC TTCTTGATCA AAGAAGGAGA CAAGATCAAG AAACTTGCCG AGCAATACGT CGAAACCGCT TCCTCTGGAG CTCACCACAA GGACAAGGAC AAGGGCAAAT GACAATCAAA TGCGTAAATA AGT 
Length2993
Protein Sequence
Protein Residue
Map Locationscaffold_6: 19508669.. 19512746
Download Sequence
A.thaliana
AGI-codeAT4G10930.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
16.1555 Ahg322057 Endonuclease/exonuclease/phosphatase family protein
19.8494 Ahg491024 phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases
22.9347 Ahg495812 DNA ligase IV
26.5518 Ahg321074 RNA-binding (RRM/RBD/RNP motifs) family protein
31.7805 Ahg939679 Galactose oxidase/kelch repeat superfamily protein
33.9853 Ahg930294 ADP-ribosylation factor C1
36.7696 Ahg476035 Chaperone DnaJ-domain superfamily protein
42 Ahg483774 BTB/POZ/Kelch-associated protein
49.4975 Ahg491814 Regulator of Vps4 activity in the MVB pathway protein
50.1996 Ahg930656 FK506-binding protein 15 kD-1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression