Detail



ID : Ahg942974

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|942974|scaffold_603518.1
Sequence
AGCCAACCAC AAAGGACAAC ATGCGTCCAT CTTTGAAGAA GCCGAATCCT GAAGCTGATT TCAAGGAGAC TTCGAATATT TTTGGTGCTA AGTGGAAAGG GATTAGTGTA GAAGAGAATA AGCCTTATGA GGAGAAGTAT CAGGCGGATA AGGAAGCTTA TCTTCAGGTT ATTACAAAGG AGAAGCGAGA GAGGGAAGCC ATGAAGCTTC TTGATGATCA GCAGAAGCAG AAAACTGCTA TGGAATTGCT TGATCAGTAT CTTCAGTTTG TTCAAGAAGC TGAACAAGAC AACAAGAAAA AGGCCAAGAA GATAAAGGAT CCGTTGAAGC CTAAACATCC AATATCTGCT TACCTGATCT ATGCTAACGA GGGGAGAGCT GCTTTAAAAG GAGAAAACAA AAGCGTTATT GAAGTCGCTA AGATAACCGG AGAAGAGTGG AAGAATTTAT CGGAAGAACA AAAGGCTCCT TATGATCAGG TCTAGTTCAT CCCAGAAATA GCGAA 
Length505
Protein Sequence
Protein Residue
Map Locationscaffold_6: 19771102.. 19771879
Download Sequence
A.thaliana
AGI-codeAT4G11080.1
DescriptionHMG (high mobility group) box protein
TAIR curator summary
Alias[3xHMG-box1][3xHigh Mobility Group-box1]
Gene coexpression
MR
MR Locus Description
11.9164 Ahg494222 Pectin lyase-like superfamily protein
12.6491 Ahg485999 ROP (rho of plants) guanine nucleotide exchange factor 6
30.7246 Ahg470351 targeting protein for XKLP2
36.4966 Ahg933236 CDK-subunit 2
36.9053 Ahg471298 cytochrome P450, family 77, subfamily B, polypeptide 1
38.6264 Ahg488576
40.6202 Ahg473589 forkhead-associated (FHA) domain-containing protein
41.2311 Ahg497288 WUSCHEL related homeobox 1
49.5379 Ahg945123 Putative membrane lipoprotein
52.0481 Ahg490341 glycosyl hydrolase 9B13
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression