Detail



ID : Ahg943062

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|943062|scaffold_603606.1
Sequence
GACTAATAAA GTAGTCGTTA ATGAGCTGTT TTCTTGTAGT GTCTACGACG GCGGCGCTTC CACCGTGCTC TTCCTCCTCC TCCGCCGCCG ACGCTTCAAC TGAGGTTCGT CGGAACCGCT ACAAAGTAGC GGTGGATGCA GAAGAAGGAA GACGGAGGAG AGAGGACAAC ATGGTTGAGA AAAGTAAGCG TGAAGAAAGC TTACTTTTAG AAGCGTCCTG AAGGTCTTCA AGCTAATCAG C 
Length241
Protein Sequence
Protein Residue
Map Locationscaffold_6: 20290444.. 20290684
Download Sequence
A.thaliana
AGI-codeAT4G16143.1
Descriptionimportin alpha isoform 2
TAIR curator summaryProtein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.
Alias[IMPA-2][importin alpha isoform 2]
Gene coexpression
MR
MR Locus Description
5.47723 Virus0713
20.6398 Ahg922577
26.533 Ahg923405
39.6106 Ahg942728 AtGCP3 interacting protein 1
47.571 Ahg940349 Transcription initiation Spt4-like protein
60.2329 Ahg486949 Carbohydrate-binding-like fold
71.5192 Ahg941076
81.9756 Ahg316746 Arabidopsis thaliana gibberellin 2-oxidase 1
82.3711 Ahg482547 Uncharacterised protein family (UPF0497)
83.1264 Ahg485337 receptor like protein 44
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression