Detail



ID : Ahg943356

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|943356|scaffold_603900.1
Sequence
TTTTTTTCAG GATTTTGACC AATGGCCTTA GATCAATCTC TTGAAGATGC TTCTGTACTT TATGGAGAAG GTGCATTTTG TTTCAAGAGC AAGAAACCTG AACCCATCTC TGTCTCGGTT TCTTCTGATG ACGGCGATGA TTCGAATTTC GACTGCAATA TTTGCCTAGA CTCAGTGCAA GAACCCGTTG TGACTCTCTG TGGTCACCTC TTCTGCTGGC CTTGTATTCA CAAATGGCTT GATGTACAGA GTTTTTCAAC AAGTGATGAA TACCAAAGAC ATAGACAGTG TCCCGTTTGT AAATCTAAAG TGTCTCATTC TACATTGGTT CCTTTGTATG GCAGAGGCCG TTGTACTACT CAGGAAGAAG GTAAAAACAG TGTGCCTAAA AGACCTGTAG GACCGGTTTA CCGGTTTGAA ATGCCGAATT CACCTTATTC CAGTACGGAT CTGCGGTTAT CACAACGGGT TCATTTCAAT AGCCCACAGG AAGGTTACTA CCCTGTCTCA GGGGTGATGA GTTCAAACAG TTTATCATAC TCTGCTGTTT TGGATCCTGT GATGGTGATG GTTGGAGAAA TGGTAGCTAC GAGATTGTTT GGAACACGAG TGATGGATAG GTTTGCATAT CCGGACACTT ACAATCTCGC AGGGACAAGC GGGCCGAGGA TGAGATGGCG GATAATGCAG GCAGATAAAT CGCTGGGAAG AATCTTCTTC TTCTTCATGT GTTGTGTTGT TCTGTGTCTT CTTTTGTTTT AAGTTCTCAT AGCTAGCTTG GT 
Length782
Protein Sequence
Protein Residue
Map Locationscaffold_6: 21692797.. 21693578
Download Sequence
A.thaliana
AGI-codeAT4G03510.1
DescriptionRING membrane-anchor 1
TAIR curator summaryRMA1 encodes a novel 28 kDa protein with a RING finger motif and a C-terminal membrane-anchoring domain that is involved in the secretory pathway. Has E3 ubiquitin ligase activity.
Alias[ATRMA1][RMA1][RING membrane-anchor 1]
Gene coexpression
MR
MR Locus Description
20.9284 Ahg950418 Galactose mutarotase-like superfamily protein
48.8057 Ahg476162 Protein of unknown function (DUF1645)
70.0357 Ahg939357 AtL5
73.4643 Ahg480439
73.5935 Ahg484447 CCR-like
80.9691 Ahg482856
98.2141 Ahg485418 indeterminate(ID)-domain 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression