Detail


ID : Ahg944446

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|944446|scaffold_700675.1
Sequence
TTGTACGGAG AGGTATTATA AATGGAGGAG GAGAAGAAGA AGAGCAGAGT TTTGATCATC GGAGCAACAG GAAGATTAGG CAACTATTTG ACCCGTTTCA GCATCGAGTC GGGTCACCCG ACTTTCGCAC TCATCAGAAA CTCCACTTCC TCCGCTAAGC TGAAATCTCT CTTCGACGCC GGCGTTACCC TCCTCAAAGG TTCATTGGAG GATGAAGGAA GCTTAGAAGA AGCAGTGAGT AAAGTAGATG TGGTGATCTC TGCAATTCCA TCAAAACATG TTCTTGATCA GAAACTCCTC ATCAAAGTCA TCAAACAAGC TGGTTCCATC AAGAGGTTTA TTCCTGCTGA ATATGGAGCA AATCCTGATA AAACTCAAAT CTCCGATCTT GATCATGGGT TCTATTCAAA GAAATGTGAG ATTAAGCGTA TGATAGAATC AGAGGGGATT CCATATACAT ACATTTGCTG CGGATTGTTC ATGAGAATTC TACTTCCATC GCTTGTGCAA CCGGGGCTTC AATCGCCTCC AATCGATAAA GTCACAGTTT TTGGAGATGG AAACGTTAAA GCTGTGTTCG TGAATGATGT CGATGTTGCA GCATTTACCA TCAAAACGAT AGATGATCCT CGAACACTGA ATAAAACATT GTACCTTAGA CCGCCCGAAA ACATATGTTC TATGAATGAT CTTGTTGAGC TCTGGGAGGG CAAGATTGAG AAGAAGCTTG AGAAAACATT TGTTACAGAG AGTCAACTTC TCAAGAAGAT CAAAGAAACT CCATATCCGG ATAACATGGA GATGGTCTTC ATATACTCTG TCTTTATCAA AGGAGATCAC ACGTACTTCG ACATCGAGTC TAGTGGTGAA GTGAATGGTA CTGAGCTTTA CCCTGATGTC AAATACATGA CCGTGAGCGA GTTTCTTGAT ACTCTTCTCT AGAATTATAA CCAAATAGCA AA
Length962
Protein Sequence
Protein Residue
Map Locationscaffold_7: 2564514.. 2565992
Download Sequence
A.thaliana
AGI-codeAT4G34540.1
DescriptionNmrA-like negative transcriptional regulator family protein
TAIR curator summaryencodes a protein whose sequence is similar to pinoresinol-lariciresinol reductase from pine.
Alias
Gene coexpression
MR
MR Locus Description
39.2428 Ahg482291 glycolipid transfer protein 1
71.3723 Ahg496218 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
82.7345 Ahg923551 ARM repeat superfamily protein
89.0786 Ahg334421
91.433 Ahg950504 Transport protein particle (TRAPP) component
96.1249 Ahg492840 Peptidase M50 family protein
99.4384 Ahg483915 Cytochrome c oxidase subunit Vc family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression