Detail



ID : Ahg936575

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|936575|scaffold_500766.1
Sequence
TTTTATTATA TATTATGAAG ATGACAAGCA GGTCAGATAA TACACGTAGT AGAGGTCGTC GCGGAGTAGT CAGTAGAGGA CGATCGAGTC GTGAAAATGC TGGTGAAGGA ACATCAAGTA GAGGTGCCAG TGGTCCAAGA CGCAATTATA AATGGACGCC TAGAACAACT CGAATATTTC TTGAGCTTGT TATCGCTGAA TTAGAGGCGG AAGACTATAC GATTAGGGTA CCATTAGCTG CTGGTAAACG GAGGATCGAA GAAAAGTTTG TTGAACTGAC TGGTGATTCG GTTAAATGGG AACCTGAGAT GAAAATTAAA TTTAATTATT TGAAAAAATT GTGGTATTTC AACAACATAT TATCCAAGCG TACTGGTACA CATGTTGATT CATCGGGGCA GATCGAGATG GAACCATCAT GGTGGAACGA TCGATGCGCG GAATTCGGTG AAACAAACAA AAAATATATA ACCGTGTTAC AAAATAAGCC TCTTCCGTTC CAAGATTTAC TAGATGTTAT ACATAGCAAA CACGATCTTG AGCAAGACTC TCGCTATTCA CCCCACATGC TTGGAGTTCA TCTTGATCTC GAAAAAGAAC CATATAATGA TGATGATGAT GATGATGATG TGCCAGTGGA TGACACAGAA GAAAATGGTC GAACCGTAGT TCCTCCGGAT AATTCTAATT TAAGAGCATA TGATGATGAT TTACCACGAC TCTCTCGGTC ACCTAGAGAG ACAACTCGAC ATGCTCGACA CTCAACGCAT GCGACGGCTT CACATGCTCG GAATACTTCG ACACGACGTA CTCATCTGAG AAGAGCAAAT TTTGAGGCAC GAATTGATGG AAGTTTTCAA CGTATGGAAG AATCTCGTAG TGAGCTACTG AATGTGGTGC GCTCACGGCA AAGCTCAAAA CCGACGTATG GTGATGCATT AGCTGTACTT GAATCATTGC CAATTGAGCC AATGAATACA TTTTGGTGGG AGGCAAACAA GTTGCTAATG AACGATGAAG ATATTCGTGA CGGATTTATG AAGTTACGAA GTGAGGAGAA TAAAATTCGA CATTTGGAGC GATTATCCGG TATGGATAGA TATGGGAATC CTTGTGATCT AATCAACTTA CGAGTAACTA GCAGTAATAG TGGAAGTGAT TATGTAAGAT CTGATGCTTC TAGCTACGGT GGTACTGGGT CTTTCGGTGG AGCATCTGTT GGTGGTGGGT CAACTGGTGG AGGATCTATT GGTGGTGGAT CGACTGGTGG AGGGTCTATC GGTGGGGGAT CGACTGGTGG AGGGTCTGTT GGTGGCGGAT CCATTGGTGG TGGATCAGTC GGTGGTGGGT CGGGTGGTGA TCAAGGTTTT GACTTAGGCA CATGGGATAA CAGTAAAATG ATGGTGTTTT TCCTTCCCCT CCACTACCAG GATCGATTTC TCCAAGTTAT TATCCTAACT CCGGGACTGG TTCAGGGTCA CGATGGACGA ATTTTTCTTC ATTATTTGGG ATTGACTCTC CTAGATATGT AGGTTCTAGT TCTGCTAATG CTCCG 
Length1555
Protein Sequence
Protein Residue
Map Locationscaffold_5: 4010879.. 4012619
Download Sequence
A.thaliana
AGI-codeAT5G28720.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
9.53939 Ahg351609 Protein of Unknown Function (DUF239)
12.4499 Ahg945147 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
14.7986 Ahg473700 transposable element gene
17.6068 Ahg921700 ENTH/VHS/GAT family protein
21.6564 Ahg341194 Homeodomain-like superfamily protein
22.8035 Ahg481664 transposable element gene
26.9815 Ahg357417 Protein kinase superfamily protein
31.7333 Ahg483350 late embryogenesis abundant domain-containing protein / LEA domain-containing protein
34.4674 Ahg914860
35.242 Ahg916456 proline-rich extensin-like family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression