Detail



ID : Ahg946331

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|946331|scaffold_702560.1
Sequence
AAATTAGAAT TCCCCTAATA ATGTCTTCGG ATCGTCACAC ACCGACGAAA GATCCACCGG ATCATCCGTC TTCTTCCTCC AACCACCACA AGCAACCACT TCCTCCTCAG CCGCAGCAAC CACTCAGCCG CTACGAATCG CAGAAACGCC GCGATTGGAA CACGTTCATC CAATACCTAA AATCACAAAA TCCACCGTTG ATGATGTCTC AGTTCGACTA CACGCACGTG CTAAGTTTCC TAAGGTACTT AGATCAGTTT GGTAAGACCA AAGTACATCA TCAAGCTTGT GTCTTCTTCG GACAACCCGA TCCACCAGGT CCGTGCACGT GTCCTCTCAA ACAAGCTTGG GGAAGCCTAG ATGCTTTGAT CGGACGGCTA AGAGCTGCTT ACGAGGAACA CGGTGGCGGG TCACCTGATG CTAACCCGTT TGCAAACGGG TCTATCCGGG TTCACTTGAG GGAAGTGAGA GAATCTCAAG CCAAGGCTCG TGGGATTCCG TACAGGAAGA AGAAGAGGAG GAAGACTAAA AACGACGTCG TTGTTATCAA GAAGGATGTT GCAAACTCTT CGACTCCTAA TCAGTCGTCC ACTTGATAAT TAATCATATT TTAAAATTT 
Length619
Protein Sequence
Protein Residue
Map Locationscaffold_7: 10009043.. 10009661
Download Sequence
A.thaliana
AGI-codeAT4G18610.1
DescriptionProtein of unknown function (DUF640)
TAIR curator summary
Alias[LSH9][LIGHT SENSITIVE HYPOCOTYLS 9]
Gene coexpression
MR
MR Locus Description
24.6982 Ahg930652 Glycosyl hydrolase superfamily protein
26.9444 Ahg923207
43.1741 Ahg949333 C2H2-like zinc finger protein
46.7654 Ahg491291 ROOT HAIR DEFECTIVE 6-LIKE 2
56.2317 Ahg350984
64.5755 Ahg932606
67.0522 Ahg921385
73.4983 Ahg485378 Leucine-rich repeat protein kinase family protein
75.0666 Ahg930560 Pentatricopeptide repeat (PPR) superfamily protein
77.7174 Ahg473769 Protein of unknown function (DUF793)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression