Detail



ID : Ahg946695

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|946695|scaffold_702924.1
Sequence
GTTTGTTGAA ACTTGGAAGA ATGACGAGTA TGAGCGATCT TCCACCGGAT TTGGTAGTCG AAATACTCAC TAGGATTCCG ATAACATCTC TGAGAGCAGT GCGATCTACT TGCAAATCAT GGAATGCTTT AACCAAAAAA TGTAATTTGG GTAAAGCAGC AGCAACAAGG CAGCAGCAGT TTGTAGGGTT CATGACGATG AGTTCTAAGG TTTGTTCAGT AAAACTTGAT TTCCAAGGAA CCCGCAAGGA CGAGAGCGAG TTCGTCGATC TATCTATAAA CCAAGTAGCT TTATTTAATC AAGTTGAGAT ATCTAAAGTC ATTCACTGTG ATGGCTTACT GTTATGTGTC ACTAAGGACA ACTCAAGGCT CCTATTGTGG AACCCTTATT TGGGACAAAC AAGTTGGATT GAACCAAGAA AATATTTCTA TAGACCCGAT CATTATGCTC TCGGATACGA CACCAACCGT AACCATAAAA TCTTGAGGTT TTTTGATGAT TTTCGCGGAG GCAATGAGTT CGAAATCTAC CATGTTAGGT CTAGTTCTTG GAGGGTTCTT GACCATATCA CTCCCGGCAA GCTTCATCAT CGCAGTGTGA CATTGAAGGG AAATACTTAC TTCTTTGCTA GAGAGAAAAT GATAGAGGTT CTTGTTAATG TATCAGAGCT TAAACATTTT TTACTCTGTT TTGATTTTAC AAGAGAGAGC TTTGGACAGC GTCTGCATCT CCCGTTTCAT ATTCATGGTA AAGAGACTGT GACTCTATCT GGTGTTAGGG AAGAGCAGCT CGCGGTGCTT TATCAGAAGG AGTCATTTGA TATGTATAAG TTGGAGATTT GGGTTACGGA TAAGATTGAT CCCAACGCAG TGTCGTGGAG CAAGTTTTTG ATGGTGGAAA TGAGACCACT CACTGGTTTT CAGTTCAATC AAGAAGCTGT GAGCTTCGCC ATTGATGAGG AGAAGAAAGT TGTTTTGGTT TTCGATCAAG AAGTATATAA CCCGACCAAG ACCATTCTCA TCCAAACAGT TTACATCATT GGAGAAGATG GATACTTCAA ATCTATGAAA ATCGGAGAAA ATCCAAATGT CTGGATGCCT GGAGAGTTCC CTAACAGGCC TAAGTTTTCT CCCCCACTTG TGTCCTCTTC TTACCTTCCA AGTCTAGTGC AAATCAACTA ACCGCGCAAA AGGAAAGTAA G 
Length1201
Protein Sequence
Protein Residue
Map Locationscaffold_7: 11709697.. 11710950
Download Sequence
A.thaliana
AGI-codeAT1G59680.1
DescriptionF-box associated ubiquitination effector family protein
TAIR curator summary
Alias[EDA1][embryo sac development arrest 1]
Gene coexpression
MR
MR Locus Description
8.77496 Ahg925784 MATE efflux family protein
18.6548 Ahg915674 F-box/RNI-like/FBD-like domains-containing protein
25.2587 Ahg933074
27.7128 Ahg345479
28.2489 Ahg933887 Transcription elongation factor (TFIIS) family protein
32.0312 Ahg915685 Disease resistance protein (TIR-NBS-LRR class) family
36.8375 Ahg489899 Subtilase family protein
39.598 Ahg486738 WRKY family transcription factor
42.7083 Ahg489145 cation/H+ exchanger 3
51.5752 Ahg947570 F-box associated ubiquitination effector family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression