Detail



ID : Ahg947866

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|947866|scaffold_704095.1
Sequence
GCGAATTGGA CTCGTAGTAC ATGATGAACA CGGAATCATT TGGTGCTTGC TTGCTTCTTA CGCTTCCAGA AGATGTGTTT ACTGTTATCT CTCGTTTTCT TTCACCAAGC GACATTTGCA ATCTAATCTT GTGCGGCAAA AGTCTTTGTG CCCTTGTCGA TTCCGAGAAG ACGTGGCTTG TGCAATGTGA AGAAGTAAAG GTTCTTCCTT TGTTTGAAAT AGTCCAATGG CGAAGCGGGA TCTCTTCTTA CAAGGCACTT TGTAGGTTTC TTGTAGAGGT GGTGAAGCCT CTTGTTGGGA TTTGGGTTCA ACAAAACCCT GAACTTGGGA ATGTCGTTTA TGTCATGCCT GGTTTCTTGT CTGTTGTTGG GTGCCGGATA ATTCCACAAA AGGTTGGTCC TTTGTGGATT CAAGAGGGCC GAGTTAAGTG GTCACCTGTG TTTGAGATAA TCTGCGGTTT TGATGGCTCT ACCGGGTTTT TCCTTCATGG AAGAGACAAA GAAGGCAGTT GCTTGTACCC TGGTTTTGTT ATGGGCATTG AGAAGAGTTG CAATTTGCTT CAACTCGAAA TTGAGCCGAG GCGAGAGAAG AGTTCGTGCA ATGAGATTGA GAGAGGAGCC TCAAGAAAGG GGGAAAAGGA GGGAGAGGTT CCATTTTGGA TGCTCGCTTT TAGCGATAGA AAAAACTTAC TCAATATTGT GACAAGCCAT GTAGGTATAC ATGTGGTGGA GCCATTAAAT GGAAGGTTAT TTCCCACATC AAAAGATGAT GAAGCAATGT TGGTCGAACG CAGAACCATG CTCTTTAAAA TGCACAAGTT TGGTGGAAAG TGGAAGAACA TGAATTTGGA GGAGGATGAT CAGTTGTGTT ACAATCCTAT GCAGCTAGAC ATAAACGAGA TGTTGGAAAA TCTTGGTGAT GACTGGTTTT TTGACATGGA AGAGGAGCTG ATAGAGGTCA CACCAACGGA GAGCACGCAT GTTTTAGGGG AGTCTAGTTC TTCAAAGAAC ACAGCACCTT CGAGCAGTGA AATTAGACAT TCGAATCGCC AAAGCTTTCT TAGCTCTGGT GATACATTTG GTCTTAGTCT CAAAGCTTCC TACTCTGAGC TAAATTCTTA CGAAGGGTGG CCATACATGT ACGCTCATCA CTTTTCACTT TATAAACTAC CGGTTAAGAA ATTCGTTGAT CACGAAGTCG AAGTGTATGC CGGTTTGTGG GGAGGAACGT TTGGCTGGCC AGCTGGGAAA TGTCCTAAAA GTAAGCCCGA AAAGTCTCTT TACTTACTGA TGCTCACTTA TGAAGAATCT GAAGAGTATA ATGAGAGAGT TCTCATTGGG ACAAAAATAC TCGAAGGAAA GCGCTATGTG AGGCGTCCCA ATGGAACTGC AATGTTTATT GTAAATATCG ATACACCTAC CCTTGAGCCC TTTCCGGTGG ATGCAGATGA AATAGATTTT GAGAATTCTT ACTCGGGAAA CGGTATCGCA GAAGGTTACG GATTCCGCTA TCCCGGTTCA AAACCTGGTT CCCTTTTCGT GATCACTAAT GATCTTCTTG CATTCGTTTG GCAAGAAACC AAAGATGTGA TTACGTTGCA AAGACTAAAC CTTGCAGAGA TCTTGAAGAA AGTTTTAGGT TCTTGTGTGC CGCCTTTGCC TCCAACTAAG AATTTTACTT ATATGAGAAG GTCCTACATA AACGAGTTTA CCAAGTCATC GACCGATCCG TCTTACTCCG ACGAGTAAAG AACATTGTAG GAAACACAT 
Length1769
Protein Sequence
Protein Residue
Map Locationscaffold_7: 21735861.. 21737629
Download Sequence
A.thaliana
AGI-codeAT5G39480.1
DescriptionF-box family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.89898 Ahg897355 RING/U-box protein with C6HC-type zinc finger
8.7178 Ahg937315 TRAF-like family protein
10.9545 Ahg937416
13.5647 Ahg923704 O-methyltransferase family protein
34.8568 Ahg476043 Dihydropterin pyrophosphokinase / Dihydropteroate synthase
35 Ahg331341
35.7491 Ahg941761
42.638 Ahg930832
45.6727 Ahg900133
48.7852 Ahg347288 AP2/B3-like transcriptional factor family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression