Detail



ID : Ahg897355

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|897355|Al_scaffold_0005_1321
Sequence
ATGGAGGAGG AAAGTACTCT AGTACGAGCA GATGATCCAA AACCCGCGGG TGAAATCAAA CTTGAATCAT CTGCGTCTGA GCAAGAGAAC ATCGCTTTGC TAATGGATGA TGTGCAACGC ATTAGACAAC GATTGACGTC TAGCTTTCCT GTTCTGGTGA CTAGGAATCA AATGAAATTT GTGTATGAAC TTGCAATGGA AACAATAGTT TCTGAAATCA GCATACATAT ACCTGATCAG AAGAAGACTT GCAGTATTTG TTCCGATGAT AACTTCGAAC CTGAGCAGAT GTTTTCTATT GATTTATGCG GTCATGAATT CTGTGTGGAG TGCATGAAAC GACATATAGA AGTGAGGCTA CTCGCGGGAG GTGTACCGAG ATGTCCTCAT TATCAATGCA GGTCTAAACT TACTCTTGGA AGCTGTGTCA ATCTTTTGAC ATCTAAACTA AAAGCAATGT GGGAACGAAT AATCGACGAG GAATCGATTC ATGTGGCGGA CAGAGTTTAT TGTCCAAACC CGAGGTGCTC AGCCTTAATG TCGGTAACCA AGCTCTCAAA CTCAAACTCT ACTAAAGAAG ATGTAACTAT GAGAAGCTGT TTCAAATGCA GTGAACCCTT TTGTATCACC TGCAAAGTTC CGTGGCATAG CAACTTGTCG TGCAACGATT ACAAGAGATT GGGTCCAAAT CCTACAGCAG ATGATATAAA GATGAAAGCT CTAGCATATA AGAAAATGTG GCGTCAATGT GAAAATTGTC AACACATAAT CGAACTTTCG GAAGGATGCA TCCATGTAAC TTGCAGGTAT AACCTCTAA 
Length819
Protein Sequence
Protein Residue
Map Locationscaffold_5: 11467212.. 11482893
Download Sequence
A.thaliana
AGI-codeAT3G45580.1
DescriptionRING/U-box protein with C6HC-type zinc finger
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.16228 Ahg911368
4.89898 Ahg947866 F-box family protein
4.89898 Ahg932787
7.14143 Ahg895432 cytochrome P450, family 714, subfamily A, polypeptide 1
11.4891 Ahg914024 Eukaryotic aspartyl protease family protein
13.5647 Ahg896903
20.567 Ahg473891
23.516 Ahg941282
27.4226 Ahg483269 calcium-dependent protein kinase 14
29.8329 Ahg929871 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression