Detail



ID : Ahg948214

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|948214|scaffold_800101.1
Sequence
GTATCCAAAG CTCTTCTTCA ATGGAGGCCG ATCTCAAGTC AACCTTTCTC AACGTTTATT CCGTTCTCAA GTCCGACCTC CTTCACGACC CTTCCTTCGA ATTCACCGAT GAATCTCGTC TCTGGGTTGA CCGTATGCTC GACTACAATG TACGTGGAGG GAAACTCAAT CGGGGTCTCT CCGTTGTTGA CAGCTTCAAA CTTTTGAAGC AAGGCAAAGA TTTGACTGAG CAAGAGGTTT TTCTCTCTTG TGCTCTCGGT TGGTGCATTG AATGGCTTCA AGCTTATTTC CTTGTACTTG ATGACATTAT GGATAACTCT GTCACCCGCC GTGGCCAACC TTGCTGGTTC AGAGTTCCTC AGGTTGGTAT GGTTGCCATC AACGATGGGA TTCTGCTTCG CAATCACATC CACAGGATTC TCAAAAAGCA CTTCCGGGGA ATGCCTTACT ATGTTGACCT CGTTGATTTG TTTAATGAGG TTGAGTTGCA AACAGCTTGT GGCCAGATGA TAGATTTGAT CACCACCTTT GAAGGCGAAA AGGATTTGTC CAAGTACTCA TTGTCAATTC ACCGGCGTAT TGTCCAGTAC AAAACGGCTT ATTACTCGTT TTATCTCCCT GTTGCTTGTG CATTGCTTAT GGCGGGTGAA AATTTGGAAA ACCATATTGA TGTGAAGAAT GTTCTTGTTG ACATGGGAAT CTACTTCCAA GTGCAGGATG ATTATCTGGA TTGTTTTGCT GATCCCGAGA CGCTTGGCAA GATAGGAACG GATATAGAAG ATTTCAAATG CTCGTGGTTG GTGGTCAAGG CATTAGAACG CTGCAGCGAA GAACAAACTA AGATATTATA TGAGAATTAT GGTAAAGCCG ACCCATCAAA CGTTGCTAAA GTGAAGGATC TCTACAAAGA GCTTGATCTT GAGGGAGTGT TCATGGAGTA TGAGAGCAAA AGCTATGAGA AGCTGATGGG AGTGATTGAG GGTCACAAAA GTACAGCAAT CCAAGCAGTG CTAAAATCCT TCTTGGCTAA GATCTACAAG AGGCAGAAGT AGTTGTAGTC TCAGCCCTCA AA 
Length1072
Protein Sequence
Protein Residue
Map Locationscaffold_8: 498591.. 500658
Download Sequence
A.thaliana
AGI-codeAT5G47770.1
Descriptionfarnesyl diphosphate synthase 1
TAIR curator summaryEncodes a protein with farnesyl diphosphate synthase activity.
Alias[FPS1][farnesyl diphosphate synthase 1]
Gene coexpression
MR
MR Locus Description
8.83176 Ahg334590 Phosphoglycerate mutase family protein
20.2731 Ahg488871 tubulin alpha-5
26.8328 Ahg480231 cycloartenol synthase 1
34.8999 Ahg496474 Xanthine/uracil permease family protein
44.3621 Ahg485907 Pectin lyase-like superfamily protein
56.3116 Ahg912808 Protein of unknown function, DUF642
59.9166 Ahg496807 Leucine-rich receptor-like protein kinase family protein
62.0645 Ahg926848 IQ-domain 31
63.1031 Ahg940624 P-loop containing nucleoside triphosphate hydrolases superfamily protein
79.1833 Ahg473518 RNA-binding (RRM/RBD/RNP motifs) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression