Detail


ID : Ahg948830

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|948830|scaffold_800717.1
Sequence
ATCGCTCTTC CTCTGTTTCA ATGGCTTCTT CCACGACGAC CCTTCTTGGC CCACCTTCCG TCACCGGCGA TTCACAGATC TTGAAACCAG TCACCATCCA TTCACCGGAA ACCCCAGTTT CCGATGAAAA CAGTTTAATC TCCCAAACCG CCACACTAAA CCTTGAAGAA CCACCACCAA TGGGTCTAAC TGAAAACTTC TCGCCGACGT TTCTTTCCTC CGGGAACCCA TGTCTCGATT TCTTCTTCCA CATCGTCCCC GATACATCTC CCGATGATCT GATCAAAAGG TTAGCTATTT CTTGGTCTCA CGATCCTTTG ACTACGTTGA AACTTGTATG CAATCTCAGA GGAGTTAGAG GAACTGGGAA ATCAGACAAA GAAGGGTTTT ACACAGCTGC GTTTTGGCTT TTCAAGAATC ATCCAAAGAC CCTAGCTTTG AATGTCCCTG CTCTTGTTGA TTTTGGGTAT TTCAAAGATT TGCCTGAGAT TCTGTTTCGG ATCTTGGAAG GTCAGCAGAT GGAGAGAGGG AAGAGTCGGG TTTGGAGGAA GAGGGTTCAA AGGAAATTCA AAGGGAAGAG TGAGAAAAGG GACGAGATTT CCGGTGACAT GGAAGATCGG ATTCTGGAAA ATGTAGAGGA GATTGGTGGT TCTGTTGATA AGGTAAAGGC TAGGGGTTTA CGGAAACAGA GAGAGTTCGA AAAGGCGAAA AAGGCGCTAG AGAGGTTTAA CTCTGATGCT AATTATAGAT TACTGTTTGA TCGAATTGCG GATTTGTTTG CGGTTATGTT GAAATCGGAT TTGAAGTGTT TGAATTCGAA TGAGTTGAAT AAGATTGGTT TAGCTTCGAA GTGGTGTCCT TCTGTTGATT CTTCGTATGA TAAGACTACT TTGATATGTG AGGCAATTGC TAGAAGGATG TTCCCTAGAG AGGAATACAA AGATATAGAA GAGGCGCATT ATGCGTATAG GATTAGAGAT AGGTTGAGGA AAGAAGTTCT TGTGCCGTTG CATAAAGCGC TTGAGTTTCC GGAGTTGTTC ATGAGTGCAA AGGAATGGAA TTTGTTGAAG TATAATAGAG TTCCTTCTGT GGCTATGAAG AATTACAAGA AGCTGTTTGA GGAACATGAT AGCGAGAGGT TTTCACAGTT TTTGGAGGAT GTGAAGTCTG GGAAGAAGAA GATTGCGGCT GGTGCGTTGC TTCCTCATCA GATAATCAAG CAGCTGGAGG ATGAGAGTGG GAGTGAAGTT GGCGCGGAAG TTGCAGAGCT TCAATGGGCG AGAATGGTTG ATGATCTTGC TAAGAAAGGG AAGCTGAAGA ATTCATTGGC GGTTTGTGAT GTCTCTGGAA GTATGTCGGG TACGCCTATG GAGGTTTGTG TAGCGCTCGG GTTATTGGTT TCGGAACTTA ATGAAGAGCC GTGGAAAGGG AAAGTTATCA CCTTTAGCGA AAACCCGCAG TTGCACATTG TCACGGGTGC GAGTCTGAGA GAAAAGACTG AGTTTGTCAG GGAAATGGAT TGGGGAATGA ACACGGATTT TCAGAAGGTA TTTGATCGTA TTCTAGAAGT TGCAGTCGAG AATAACTTAA CCGATGAGCA GATGATCAAG CGGTTGTTTG TGTTCAGTGA CATGGAGTTT GATGATGCAA TGGCAAACAG CCATTCAGAG GTGAGTTACC GTCTGAGTGT GGAGGACCGG TTGAAGATAA AGAAGCAACG ATCCAAGGAG AAATGGGAGA CAGATTATGA GGTGGTTCAG AGGAAGTATA AGGAGAAGGG TTTTCAGAAT GTTCCAGAAA TGGTATTTTG GAACTTAAGA GACTCATCGG CTACACCCGT GGTGGCTAAC CAGAAAGGAG TAGCTATGGT TAGCGGGTTT TCGAAGAATC TACTGACTCT GTTTCTTGAG GAAGGTGGGA TTGTGCATCC TGAAGATGTC ATGTGGTTAG CCATCAAAGG TGAGGAGTAT AAGAAGCTTG TTGTTTATGA CTGAGATACA CATACACAAG CTTC
Length2014
Protein Sequence
Protein Residue
Map Locationscaffold_8: 4099599.. 4101609
Download Sequence
A.thaliana
AGI-codeAT5G43400.1
DescriptionUncharacterised conserved protein UCP015417, vWA
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.3923 Ahg312221 Pectin lyase-like superfamily protein
19.1311 Ahg336658
32.5269 Ahg920114
38.0789 Ahg490208 transposable element gene
48.5592 Ahg351609 Protein of Unknown Function (DUF239)
51.5364 Ahg901222 homeobox-3
52.3927 Ahg941608 Glycosyl hydrolase superfamily protein
54.8635 Ahg359005
55.6866 Ahg479634 F-box and associated interaction domains-containing protein
56.3738 Ahg937999
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression