Detail



ID : Ahg948887

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|948887|scaffold_800774.1
Sequence
AACCAAATCT CAGATCTTTC ATGGACCACT TCTCTTGCAA GAATACAAAC AAGATGGCCA GGACCCACGT TGTTGTCGGT TCCAGACCGT GTTGTTTCTT CTGTGCCATG GAGGAAAAAG ACCCTTGTGT TAGAAAAGCA TGGTTAGAGT TATCTCTGAG AGATATGCAC ATGACAAGAG ACGACACAGA GCTTGCTCTA ACACTCAGTT TTATCTGGAG ATACGCCATG TCTGACCCCG AGAACCCCGA GTTACCGACT CTCGGGGTCT TTGAGTGCAT GACAAGGTTG ATGAAGAAAG GTCTTGAGGA TGTAGAATGG GTAATGACTG GCCAAAATGT GTATGTTCCT TACTATGCTG CTCATATCAT TGGATCTTAC ACCATGAAGA ACTCTGAGTT TGCTGCAAAA GCAGTGGAGT CTGGGGTAAT AGCTCCATTG CTTGAGCTTA TGAGAGGTAA AATGAGTTGG GTGGAGCAAA GAGTAGTGGT TAGGGCGTTA GGTCACTTGG CGAGCTACGA GACAACGTTT GAGGCAGTGG CTGCGTACGA GAATGAAGTA ATGAGATTAG CCATGGAGAT TGCAACGACA TGTGTTGATG TTGTGTATGA GGAGTTTGTA AGTGTTCAAG AAAAAGGAAG AGTGAGGTAT CACAGTGAAT TGCTTACTAG AGGACTTGGA GGGTTAGAGA TGGAAGACCG AAAAGCCGAG GAATGGGCAA GCCAACTCCA ATGCTGGTCA CTACATTTAC TCAATTGCTT TGCTTACAAG CAAAGGTGTA TTTCTCTTAT TTGCAACAAA ACCTTTCTCA AGGAGCTTAG CCAAATGTGG GGTGGATTGG TTAACCAAAC TTCTCCTGCA GGAATCGGTC TAATTCGGAT TATTTGCTAT AGTAAACAAG GGCGAAGACA TGTATCGGGA TCGAGAGAAA TGATACTGAG TCTATGCAAT CTCTCCCGGT CTTCTGATGA TTGGCAATAC ATGGGTATAG ATTGCCTACT GCTCCTTCTT AAAGACCAAG AAACAAGGTA CAAAGTCTTA GAGATGTCAT TGTTTTATCT AGTAGACCTA GTTGAGCTTA AAGCTCTTAA CGTCAGACCA AACCTAGGTG ATAGAATAAC TAAGGTTCTT GTAATGCATT ACAACACAAA GAAAGGTTGT GTTTACTCTC ACAAGGCCCA AAAGGCTTTG AAAGAACTAT GGAGGAATAA AGTAGAGAGG AGAAAGAGGG AGCGAAAGTT TATGAGTAAG AATAAAGAAT TTCTGACAGA GACAAGTGTT GTCGTAAATT TGATTAAGCA GCAAGCAAAC CAATTGCTTT GTGTAGGAGA CATAGAGGGA GCTATTAAAT GCTACAACGA AGCGATAGGC TTATGTCCTT TGAAACTTAG GAGAAAGAGA ATGATTCTTT ATAGCGAAAG AGGAGAGTGT TACTTACTTC TTGGAGATGT AGATGCGGCT ATAAGTGATT GCACAAGAGC TCTTTGCTTG TCGGAACCAG TGAATTCACA TGGTAAGAGT CTTTGGACAA GATCAAGAGC TTATGACATC AAAGGGCTTT CAAGAGAAAG CTTGATGGAT TGTATCATGT TTGTCAATGG CCGCTGCTTT CGTGGTAATA TTCCTTACTA TGCTGCTCAA ATGATCAGCA AACAGATGGA GGCTACATGG CTTTTTGAAG AGGCTAGAGC ATCAAAGCTT AGAAGAATGA TGCACAAGGA GAAATATCAC TTAACTGGTA TATTCATTTT CTTATACATA TGTGTATGAA TATACGATTT TGGATCTCAT 
Length1790
Protein Sequence
Protein Residue
Map Locationscaffold_8: 4427472.. 4429262
Download Sequence
A.thaliana
AGI-codeAT5G43120.1
DescriptionARM-repeat/Tetratricopeptide repeat (TPR)-like protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
17.1756 Ahg930560 Pentatricopeptide repeat (PPR) superfamily protein
46.2169 Ahg902963 Protein of unknown function (DUF569)
51.264 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
55.9643 Ahg497162 thioredoxin H-type 8
56.6039 Ahg940858 Integrase-type DNA-binding superfamily protein
56.745 Ahg916472
59.1693 Ahg480035 Major facilitator superfamily protein
60.3324 Ahg325356 Pectin lyase-like superfamily protein
72.8354 Ahg947946
73.3826 Ahg321648 glycosyl hydrolase family 17 protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression