Detail


ID : Ahg949022

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|949022|scaffold_800909.1
Sequence
CCGCCGTCAC TTTGATCCTC CTATGGCGTT CGAAGGACTC CCACCTCTAA TCGCTCACCA GCTCCACTAC TTACTCAACC ACTCGCCTGA TTCCATCAAG ATCGAAAATG TCTGGTCTGG TAACAAGATT AATCCCAAGA TTCTCGATCG CTTTACTTTG GTGATACCTT ATTGTCTAGA GACTATCAAA TGGGATGTTA TTTACAATTC AGAGTATCCA GTGGATCCTC CTGATTTCGT ATTCGGACCA GACGACGAAG ATTTTATGCC GTGTAGTGCT ATTGCTCCTG ATGATGATCA GATATCATCA TTGAAGAAGG CTTTGTCCGA GTGGGATAAC GAGGACTCGA CGCGGTTACT TGTTATCATT CAAGGATTGA GGGATCAATA TGTGGCATAC CAAAGAAGGC GTGTGGGCCA AGTTGATGAT GATCGCGTGA AGTTTGAGAT TAGCACCGTT TTAACTCGCA AGGGAATTGA AATGCAAATG GCTTCAGGAG TTGACAAGCC AGAGGAAGTC AAGTTTGCAG TACCTCTTGT GATGGATATG AACATAAACA AAATGGTAGC GGGGTGTCCT TGGAAGCATC AGCAGAAGAT TTATCTTCAG GTAGTATACC CGATTCTTCG AAAATATGAA TCTGCACCTT CGACACCTCG TTTGAGATTA GTATCATCTT CTGATTTAAA AGCTCTATTC TCTGTTGAGG ATGTTAAACT TCCTCCATGG ATGGACGGGA TGTGCTTGGC TGAATATCTT CCTCATCTCG AAGAAACTCT TGAGAGACAA ATTGAGGAAG CTGTTTCTGC AATTGATTTA AGGAGGAGTT TTATTGAGGC TTTGACTCTT TTTCTTGGAA GACCTCTTGA AGCTGATCCT ACCTTTTGCC GTAAGGCTAC ATTCCTTACT GCCTCTGGAC AATTTACTTT CACGGTTCAT TTCTTCTTTT CAACTCAATT TCCGAAGCAG CAACCAACCC TAATGCTTCA GAGTTGTCAG CATTTAAACC AATCGAGCGT GCCGGTAAAA TCAAACCTCT TCACTGAGTA CCCATGGAGT CCAAGATGGG AAGTGGGGCG CATGGCTGAG AGACTGTGTG ACTTCCTGAC CGACGAGACT GTCAACTTCA AAAAATATTG TAACGAAGCT CTACTCCAAC ATTAGTGTAT CTATATTTAA AGTTAGTTTT
Length1190
Protein Sequence
Protein Residue
Map Locationscaffold_8: 5934244.. 5936968
Download Sequence
A.thaliana
AGI-codeAT5G42470.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12.2066 Ahg496886 F-box/RNI-like superfamily protein
13.4164 Ahg331168 Zn-dependent exopeptidases superfamily protein
20 Ahg494291 Syntaxin/t-SNARE family protein
33.4963 Ahg490290 ETO1-like 1
35.9444 Ahg940706 RNA-binding (RRM/RBD/RNP motifs) family protein
36.606 Ahg472439 membrane-anchored ubiquitin-fold protein 6 precursor
38.9872 Ahg323555 Tetratricopeptide repeat (TPR)-like superfamily protein
43.2319 Ahg925419 Protein kinase superfamily protein
56.921 Ahg891524 homolog of xeroderma pigmentosum complementation group B 1
65.6582 Ahg473593 C2H2 and C2HC zinc fingers superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression