Detail



ID : Ahg949952

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|949952|scaffold_801839.1
Sequence
TTTCGTGATT ATGAAACACT GATGTCGACA TCGGACGTTG AGCTATTGAA GAGGGCGTGG CGAGAAGGCG GCGAAGAAAC AATTGAAGAT TATGTGGAAA ATGGCATAGA CCCTCTCATG GTGTCTCTTT ATCAGATGGA TTTGGACAGA GCCCAGTTTC TACTCAGATC TTATCTCAGG GTTAGGCTTC TCAAGGTGAT GCTATCGGCG GTCAGAGTTG TTTCCGAAGG AGCTGGCGAC AAAGGTGTAG TCTGGTCAGA AGGAGAAGCA GGAGACTGAA CAGGGGATGG AGATTTTGG 
Length299
Protein Sequence
Protein Residue
Map Locationscaffold_8: 14889051.. 14889623
Download Sequence
A.thaliana
AGI-codeAT5G49010.1
DescriptionDNA replication protein-related
TAIR curator summarySimilar to the SLD5 component of GINS complex, which in other organism was shown to be involved in the initiation of DNA replication.
Alias[EMB2812][SLD5][EMBRYO DEFECTIVE 2812][SYNTHETIC LETHALITY WITH DPB11-1 5]
Gene coexpression
MR
MR Locus Description
21.4243 Ahg906234
23.516 Ahg942130 Leucine-rich repeat (LRR) family protein
27.1662 Ahg949847 DNA replication protein-related
27.7128 Ahg921186 Histone superfamily protein
27.7128 Ahg921188 Histone superfamily protein
29.8329 Ahg938877 DNA replication protein-related
29.8664 Ahg890702
38.9615 Ahg341711 phosphatidic acid phosphatase-related / PAP2-related
47.3814 Ahg946330 PYR1-like 13
47.5289 Ahg946038
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression