Detail



ID : Ahg950263

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950263|scaffold_802150.1
Sequence
AAAACCCTAG AGAGATAGAG ATGTTTCGAG CGGTGGGATC GGCTCTCAAG AGGAACAAAG AAGCGTTTAA TGGAATCGCT CGAGGATTCA CCACTTCGTC TCATCGAGTT TTCACTTCTA ACATTACAGC TGCTACTGTA ACCTCTGCTT CGTCTTCTTC TCTAGCTGGA AACTCCTTCT ATGGCTTGCG ATCTCTTCTC AAGGGTCAAA ATGCTTCAAT GTTTAGGAAG ATGTCAACTG TAGCCTCGAT TAGCTCAGAG AGTAAAGAGG GTTTGAAGCA TCTTGTCACT GGAGGACCTC AAGCTAGGAA ATGGGTTGGG ATATGGCTTT TTGGTTCTGC TACTTGGGTT TTCAGCATGG TTGTACTAGG CGGAGTAACC CGATTTACTC GATCTGGTTT ATCGATGACT GATTGGAAAT TCACTGGTGA ATTCCCTCCT CTGTCAGATG AAGCTTGGGT TAAGGAGTTT GAGAAATATA AGCAGTCGCC TGCATACAAG CGTGTGAACA AAGGGATGAA TCTTGAAGAT TTTAAGTTCA TATATTGGAT GGAGTATGCT CATCGAATGT GGGGAAGAGG ATTGGGAATC ATGTTTGCTT TGCCGTTTTC TTATTTTCTG CGGAAAGGGT ATATTACTCT ACGTCTTGGA GTTCAGCTCT CTGGTTTATT TGCGCTTGGT GCTGGACAAG GTTTCATTGG TTGGTGGATG GTTAAAAGTG GTTTAGAGGA GCCGCCGTCT GAATATTCTC AACCGAGGGT AAGCCCATAC CGTCTTGCAG CTCACCTGAC CTCAGCTTTT GCCATTTATT GTGGACTTTT CTGGACCGCT CTCTCTGTTG TTATGCCTGA ACCACCAGCT GAGTCACTGG CTTGGGTTCG GGGAGCAGCT AAAGTGAAGA AGCTTGCATT ACCAGTAAGC TTAATTGTTG GTATCACTGC AATTTCAGGA GCATTTGTTG CTGGAAATGA TGCTGGTCGT GCATTCAACA CATTCCCAAA AATGGGTGAC ACATGGATCC CTGATAATAT ATTTGAGATG AAACCACTTT TACGCAATTT TTTCGAGAAC ACAGCAACTG TTCAGCTTGA TCATCGCCTT CTTGCAACCA CAACGCTAAT AGCAATTGGA ACAATGTGGT GGTTCACTAG GAAGCTAGAC ATACATCCAG CCGTTAAAGC TTTGATCGGA AGTACTGTTG GAATGACTGC TGTTCAGGTG ACATTAGGTG TATCAACGCT TCTGAGCTAT GTTCCGGTTT CACTAGGAAG TGCACACCAA GCAGGAGCTT TAACACTTCT CACTTTGATG CTACTTCTCA ATCACACTCT TCGGAGGCCA TCGCCTTCTC TTCTCAAATC CCTTCCACAA GTTGCTAAAT CAAATTTCAG CTAAGCAGCC CTCTTCACCA AAATCTTTCC 
Length1420
Protein Sequence
Protein Residue
Map Locationscaffold_8: 16281426.. 16287957
Download Sequence
A.thaliana
AGI-codeAT5G56090.1
Descriptioncytochrome c oxidase 15
TAIR curator summaryEncodes a homolog of COX15. Microarray analysis show a 3.2 fold increase in transcription after treatment with rotenone, an electron transport chain inhibitor.
Alias[COX15][cytochrome c oxidase 15]
Gene coexpression
MR
MR Locus Description
25.3772 Ahg897242 Protein of unknown function (DUF626)
33.2866 Ahg934198
58.7112 Ahg331566 cytochrome P450, family 96, subfamily A, polypeptide 11
69.9142 Ahg474922 Protein kinase family protein
80.8703 Ahg475652 delta(3), delta(2)-enoyl CoA isomerase 1
83.666 Ahg487791 magnesium transporter 7
84.6227 Ahg909961
87.3613 Ahg494507 DNA-directed DNA polymerases
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression