Detail



ID : Ahg950288

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950288|scaffold_802175.1
Sequence
TTCATTCCAA TGATAAGAGA ATGATACAGA GAATCAATGC CTTGAGCTTA AGTTCTGGTC TAAATTGGTT CGTTACCTCT CTGAAAATCC ATGGAACAAA CCTCAAAACA TTAAAGCAAT CTCATTGTTT CATGATCATA ACCGGTTTAA ACCGAGACAA TCTCAACGTT GCCAAATTCA TAGAAGCATG TTCCAATGCA GGACATCTCC GATATGCTTA CTCTGTATTT ACCCATCAGC CATTTCCCAA TACTTATCTG CACAACACCA TGATTAGAGC TTTGTCTCTC GTCGACGAAC GGAATGCGCA CTCGATTGCG ATCACGGTTT ATAGAAAGTT CTGGGCTTTT TGCGCTAAGC CTGACACGTT TACTTTCCCG TTTGTGTTGA AGATTGTTGT TCGGGTTTCT GATGTTTGGT TTGGGAGACA GGTTCATGGG CAAACAGTGG TTTTTGGGTT TGATTCGAGT TTTCATGTTG TGACAGGTTT GATTCAGATG TATTCGTCGT GTGGTGGTTT GAGAGATGCA CGTAAGGTGT TCGATGAAAT GCGTGTCAGG GATGTGAATG TTTGGAATGC GTTATTAGCA GGGTATGGGA AAGTGGGTGA GATGGATGAA GCTAGGGGTT TGCTGGAGAT GATGCCTTGT TGGGTAAGAA ATGCAGTTTC TTGGACTTGT GTGATCTCTG GATATGCGAG GAGTGGACGA GCTAGCGAAG CTATTGAAGT GTTTCAGAGA ATGCTGATGG AAAATGTTGA CCCTGATGAA GTTACGCTTT TGGCTGTTCT CTCCGCTTGT GCTGATCTTG GTTCACTTGA ATTGGGTGAA AGAATATGTA GCTACGTTGA TCACCGAGGG ATGAACAGAG CGGTTTCGTT GAACAATGCA GTCATTGATA TGTATGCGAA ATCAGGGAAT ATAACAAAGG CGTTGGAGGT GTTTGAGAGT GTTAATGAGA GAAATGTGGT TACTTGGACT ACTATAATAA CTGGGCTAGC TACGCACGGG CACGGAGCTG AAGCCTTGGT GATGTTTGAC CGTATGGTTA AAGCTGGTGT GAAACCTAAC GATGTTACTT TCATTGCAAT CCTTTCAGCT TGCAGTCATG TCGGTTGGGT CGATCTTGGA AAACGGTTTT TTAACTCAAT GAGATCGAAG TACGGGATTA ATCCGAACAT TGAGCATTAC GGATGCATGA TTGATTTGCT AGGACGAGCA GGTAAACTTC GAGAAGCGGA AGAAGTTATT AAAAGCATGC CCTTTGAGTC TAATGCTGCA ATATGGGGAT CTCTTCTTGC TGCTTCAAAT GTTCATCATG ATATTGATGT TGGAGAAAGA GCTTTATATC AGCTGATTAA GCTAGAACCG AATAACAGCG GTAACTATAT GCTTTTAGCT AATTTATACT CGAATTTAGG GAGGTGGGAT GAGTCGAGGA TGATGAGGAA GATGATTAAA GGGATTGGTG TGAAGAAACT GGCTGGTGAA AGCTCCATAG AAGTTGAAAA CAGAGTATAT AAATTCATCT CAGGGGATCT TTCGCATCCT CAAGTCGAAA AGATTCATGA ACTTCTACAA GAGATGGATT TGCAGATACA AAGCAATGAA GTTTGAGATA TAAAAGGATT TGAATT 
Length1636
Protein Sequence
Protein Residue
Map Locationscaffold_8: 16400848.. 16402479
Download Sequence
A.thaliana
AGI-codeAT5G56310.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
36.1939 Ahg927040
49.3559 Ahg930033 Integrase-type DNA-binding superfamily protein
66.2495 Ahg471935 MADS-box transcription factor family protein
66.7533 Ahg942188 Plant self-incompatibility protein S1 family
77.5564 Ahg936167 Adenine nucleotide alpha hydrolases-like superfamily protein
98.8939 Ahg485911 Papain family cysteine protease
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression