Detail



ID : Ahg950392

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950392|scaffold_802279.1
Sequence
AAACAGGACA ATTAGGTTTC ATGGGCACAA ACTACTCATA TGGCTTGCCT TATGGATCAT CAAACGAGTC ATCGAGATCA GTACCTTTGA TTGATTCCTT GGGTTTAAAG CAAAATCAGC GAGTCACGAA CTCGATTGCC AAATTCAGAC GTCAGAATTC TTGCACCATT GAGTTTGATT TGGGTGGAAA CGAATATGAG AAGGGTGAGA AAGCTGAAAA TGACAAGGGA AATGAGACAA TCACTCTTGA TTTGGGGCGT TCTCTGTTTC GATCAGATTC CCTAACAGAG ACCAAAAAGA AGATCAGTGA TTTGGTCAAA GTTTTGGAGG AGAGTCTTCC ATGGCAAACT GTGACAATGC GTCTAATTGC TGAGAGTTTA ATGGATTGCG TGTCAAAGAA GAAAGACGCT TGGATTATGA TCGAGGGCAG GGACATAGCC GCGAAGAGGA GAGTAGCTCG TACTGTATCT GAATCTGTTT TCGGATCTAT CGAGTCTCTG GTTCATATTG ACCTTAAGAA GAAAGGCAAC GAGTCAAAGA CCAGCCCGGA AACGCTACTT GCTTGTGAAT TGAAGAACCC TGAGAAGGTT GTATTCTTGA TTGAGGACAT CGATTTGGCG GATTCCCGTT TCTTGAAACT CCTTGCTGAC CGGTTTGAGG AGAGGCGGAG GAGTAAAACC GGCTTTGATC ATCGCCAAGC GATCTTTATT TTGACGAAGG AGGATTCAAG CAATGCAAGA AACAGAGACT CTGTTTTACA AATTGGTTTG GAGATCACGG CACAGAGTCC GGGGAAAAAG AGAAAACCCG AGTCGGATTT ATCGGTTAGG GAGGGGAAGA ATTCTAAGGC GGGAGAGATC GAGAATGGGT TTTGGATCAA GAAGGAAGTG TGCTCTAGGC AATCGAGTTT CAATAGCTCT TATCTCGACC TGAACATAAA AGCTGAAGAA GAAGAAGGAG AGATCAGTCC GATTTCAAGC GATTTAACCG GAGAGGAGGA GACAGAGTTC TCTTCCAGCA ACTTTTTAAA CCGAATTCAA AACCGGTTTG TCCTAAACCA GTCATGCGAA CCAGGTATAG AAAAAGCCAT GATAACAGCA GCTTTCAGGG AGGTTTTTCC AGAGAAGGAA GGAGGTGGAG TTAGGTTTAG CGTGGAGGAT AAGTTAGCGG AGGAGCTATG CGGGGTTCAA AACGGTGCGT TTGAAAGTTG GTTAAAGGAG GTTTTTCAAA CGGGGTTACT AACGGTTAAA AAGGGCGGGA AAAAGGATAC GGGTGTAATT AGGATGGTGT TTGGGGGTAT AGTTGACAAC AAAGGATATG GTGGGGGTGT TGGTGGGTAC ATGGGTACAT TTCTTCCGAA CAAAGTCCAA GTTTCCAAGT TCGAGTAGAT CTTTCGGTTT AATTTCTT 
Length1408
Protein Sequence
Protein Residue
Map Locationscaffold_8: 16877063.. 16878482
Download Sequence
A.thaliana
AGI-codeAT5G57130.1
DescriptionClp amino terminal domain-containing protein
TAIR curator summary
Alias[SMXL5][SMAX1-like 5]
Gene coexpression
MR
MR Locus Description
4.89898 Ahg493070 CheY-like two-component responsive regulator family protein
5.47723 Ahg478217 Protein of unknown function (DUF740)
9.48683 Ahg934932 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
13.2288 Ahg473698
17.2337 Ahg477950 HCO3- transporter family
18.1659 Ahg487140 GDSL-like Lipase/Acylhydrolase superfamily protein
26.0768 Ahg483612 Protein kinase superfamily protein
26.4953 Ahg321364 Leucine-rich repeat protein kinase family protein
29.9666 Ahg471399 Nucleotide-sugar transporter family protein
39.4968 Ahg493003 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression