Detail



ID : Ahg950510

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950510|scaffold_802397.1
Sequence
GAATATCAGA TTATAAAACT ATGAAGTTGC TGCTCCCTCC TTCTGAATCC CATCTCGTCC CAAGTCTTAG CAAGAAACAG AATGAAGATG ATAGTGACAG AAAAGAAGAA GATGGTAAGG GGAATGAACA CAATGGTATG GAGTCATGTA CCCGAATGAA GCGTACCGTT TGGACAGTGG AGCTCCACCA GAAGTTTGTC AATGCTGTTC AGCAATTGGG AGGCGTCGAC AAGGCTTCTC CTGAACAAAT ACATGCTCTC ATGAATGTAG AAGGTCTCCC AGTGATAAAT GTAGCCAGCC ATTTGCAGAA GTACAGACTG TACTTGAAAA AGATAGACGA AGGTCAGCAG CTGTACATGG CCACAAGACA ACTGCTCTTA TCCGCAGGTT CCCATCTCCC CCAAACGCCA TCCACAAAAC ACTGCTCCAG CTTCATCCAA CAGGGGCATC ACCAGAACTC AAGCAACTCA GCTAATCCAT CTGAAACATA TCACACTACT CTGTCACCAA GAGTCCAGAA AGTGAATACG TTTCAACCAA GTTCATCTCC ACTAAAGCCC CTATTGTTTC CTAAAAGCAA TATCTCTGCA TACAAGGAAG ATTTTAAAGG CATAAAGGAC ACAGCAAATG TTGGTAATAG CTCCATAGAT TCTTCCAAGC CACGCAACAG TTTCCAAACA GCCTCTAAAT TTCCAAAGAC GGATCCTTGT ACCGGAAGCT ACATAATTGA TATTATGACA GAGCCCTACT ACTACGGAAA GGCTTCTCGG AGACACAGAT TCTTCTTCCC AATGCTGCTA GCTGCCGGTG ACTGTGATCT TAATCAAATT AAAACCCTAA TAACCGAAGC TGAACATTCT CTGCTAATCT ATCACCGTAC TCCGTTACCA AGAGTCGAGA AGGTGAATCT GTCTCAACCA AGTTCAAATC CACTAGAGCC CCTCGTGTTT CCTAAAAGCA ATTTCTCTGC ATACATGGGA GATTTTAAAA GCATAAAAGA GCCAGAAATT GTCCAAGAGT CACGTACTCG AAAGAATCAC GGCCGTGTCG TTTGGTCACA TGAACTCCAC CAGAAGTTTC TCCATGCCAT TGACCAATTG GGCGGAAACG ACAAGGCTAT TCCCAAGAAA ATACTTGCCG TCATGAATGT AGAAGGTCTC ACTAGGCTAA ACGTAGCCAC CCATTTGCAG AAGTACAGAC AATGTTGTTC AACCGAAGCT CAGCAGCTGA ACATGGCCAC AAGAAAACTA CCAAGCTCGG AACATCTGCC CCAAAGTCCA TCGACAAATC ATCACAGTAG TCTGTCACCA AGAGTCCAGG ACGTGAATAT ACGTTTCAAC CAACTTCATC TCCACTAAAG CCCCTCTTGT TTCCTAAA 
Length1378
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT5G58080.1
Descriptionresponse regulator 18
TAIR curator summarymember of Response Regulator: B- Type
Alias[ARR18][RR18][response regulator 18]
Gene coexpression
MR
MR Locus Description
11.6189 Ahg949628
15.8745 Ahg933796 CCT motif family protein
21.4942 Ahg921083 Vacuolar iron transporter (VIT) family protein
26.4764 Ahg483279 Protein kinase superfamily protein
57.9396 Ahg932302 Plant self-incompatibility protein S1 family
62.9921 Ahg937876 TRAF-like family protein
62.9921 Ahg943361 TRAF-like family protein
71.4143 Ahg907996 DegP protease 3
72.7049 Ahg934862 Protein kinase superfamily protein
74.5721 Ahg492991
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression