Detail



ID : Ahg950687

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950687|scaffold_802574.1
Sequence
AGGTTTTAGC TAATCAGGGC ATGAAACGGA TCTGCTCGTT TTCAAGTGTT CAACTTTTTT CTAGAAGTTT CAGAGCTTTA GCATCGCCAC GATCTTTGAA CTATCCCCTG CAGTCTCTCA AGCGTTCATC AGTTCGGATG GAGAGTTGCA ACTTTTCTTC TGGTGTCAGA ACCGAGAGTA GTGTAAAGCC AAGAGGAGCA TTGATAGTTC TAGAAGGTCT TGATCGCAGC GGGAAATCAA CGCAGTGTGC TAAGCTACTC TCTTTCTTGG AGGGTTTAGG ACATCCGACC GAGCTCTGGA GATTCCCCGA TAGAGAAACG AGTGTCGGTC AGATGATATC CGCTTACCTC TCTAATAAGT CGCAGTTAGA TGATCACACA ATTCATCTCC TTTTCAGCGC CAATCGTTGG GAGAAAAGGT CATTGATGGA GGAAAAGCTT AAAACAGGAA CTACGCTTAT CGTTGATCGT TATTCATATT CTGGTGTTGC ATTCTCATCA GCTAAAGGTC TCAATATCGA TTGGTGCAAG GCCCCGGAAA TCGGGTTACT GGCTCCAGAT TCCGTATTGT ACCTTGACAT TTCACCTGAA AGAGCTGCTG AGAGAGGTGG ATATGGAGAC GAGAGGTACG AGCGAGTGGA GTTTCAGAAA AAAGTCGCAG ACTTTTATCA AACCCTACGT GATTCTTCAT GGAAGATAAT CAATGCAGGT GAAGCCATGG AGGAAGTAGA GAAGAAGATT CAAGAAGTGG CATTAGATAA AGTCAAAGAG TGTACTAAAG GAAAGCCTCT GTCACTCCTA TGGTCGTCAT AAAACGTTTT CGAGTCATAG CACTT 
Length835
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT5G59440.3
DescriptionP-loop containing nucleoside triphosphate hydrolases superfamily protein
TAIR curator summaryEncodes thymidylate kinase which exists in two isoforms in plants. The longer variant of 263 amino acids with a N-terminal extension that is required for localization to the mitochondrion. The second isoform of 224 residues is localized to the cytoplasm and nucleoplasm. Peak of expression occurs during G1/S phase transition.
Alias[ATTMPK.1][ATTMPK.2][ZEU1][ARABIDOPSIS THALIANA THYMIDYLATE KINASE.1][ARABIDOPSIS THALIANA THYMIDYLATE KINASE.2][ZEUS1]
Gene coexpression
MR
MR Locus Description
22.4499 Ahg947275 mitochondrial acyl carrier protein 2
40.3113 Ahg496216 Ribosomal protein L11 family protein
52.8204 Ahg906059 Transducin/WD40 repeat-like superfamily protein
56.9912 Ahg941931 septum site-determining protein (MIND)
89.5768 Ahg328285 Ribosomal protein S25 family protein
92.0054 Ahg944513 Class I glutamine amidotransferase-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression