Detail



ID : Ahg906059

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|906059|Al_scaffold_0003_3187
Sequence
ATGTCATCCG GAATATCCAC ATATCAAGAA TCGTATTCCC CAGGGTTTCT GTCTGGTTAT CAAGATCCAA GACCGAAACA GCATGTACCT GGATTCTTAT CCTCTGATGA AGCTTTTACA TCTCGGTTCG GTACAACTTC AATCAGCAAT TTTAAAACAA AAGTGGCAAG AACTAAACCA AGGCGTCAAA AGGATTCTGA ATTTCAAACT AATCCATCCA AGAAGCCAAG TCTAGCATCC TCATCAAGCC ATGAGTCGGT TCAAGATGAA AAGAAAGAGG ATGTTGCAAA GAAGGAAGAT ATTGCGATGA TCGAGTTTTC AATGTCTAAT TTATTAGACA ATCTTGCGAG GACATCTGAC GACGAAAGAC AAAAATTGCA AATTCAATCA AAAGAGCAGC AACCACAACC AATCGTTACA ATGAATCACA TTTCAGCTCT TTCAGATTCA ACCTCTTCCG CCAATGAATC AGAAACAGAT GAATCTCTTC CAAATCAGTT TGCGATAGGA GAAGAGTCAC ATATTCCAAA AGAAGAACCA ATCTATGAAG TAGTTTCAAG TGACGACGAG ATGGGCTATG AAACGCAAGA TGATGGAGAG AGAGAATCAT CGGTCGATGG TCATGAGGGA TCAGATGATT ATGAAAGTGA ACAACTAGAT GGTGAGGATG ATGGGAGTGA CCACGGTTCT GAGCAAGATG AAGAGAGCGA TTCTTCAGAA GATGAGGTTG CTCCAAGAAA TACAGTTGGC AATGTTCCCT TGGAATGGTA TAAGGATGAG ACACATATTG GTTATGACAT CTTTGGGAAG AAGATTACCA AGAAAGAAAC GGGAGATATA ATTAACTCTT TTCTTGCAAC TAGGGATTAC TCCAAGAATT GGTGCAAGAT TTACGATGAA TATAATGACG AGGAAGTGGA GCTGACTAAA GAGGATATAA AGCTCATGCG TAGAATTCTC AAAGGGGAAG CGCCACATGC TGACTTCGAT TCATGTCCGC CTTATGTTGA CTGGTTCGAA TGGGTTGACG CAAGACATCC ACTCTCAAGT GCACCAGAAC CCAAGCGAAG GTTCCTCCCT TCAAAATGCG AGGCTAAAAT GGTTGCTAAG CTCGTTAGAG CAATCTGGAA GGGGTTGATC AAGTTTTCTA AGCCTGGAGA AGTGCCAAAT GTATACCTCT TATGGGGTGA TGATTCAACT TCAGATCAAA AGAACAAGCA ATTAACTTAT ATTCCTCCAC CAAAACATAA ATTGCCAGAG GAAGAGCAAG CCTCATGTGA CTTGTTGTGT GAGGAAGATC GTCCAAAATT CATTCCTAAA AAGTTTACAT CTCTGAGAAG CATTCCAGCA TATGCGAATG CACTAAAAGA GTCTTTTGAC CGTTGTTTGG ATCTATACCT ATGTCCGAGA GTCCGAAAGA AGAGAATAAA CATTGATCCT GAATCTTTAA AGCCTAAGCT ACCTAGTAGA AAAGATCTTA GAGCTTATCC AGACTCATGT TATCTTGAAT ATAAAGGCCA TACAGGAAAA GTTACTACCA TATCCACTGA TTGTTATGGC CAATGGATAG CCTCAGGTTC AACAGATGGA TCCGTCCGTA TATGGGAAGT GGAAACTGGT AGATGTCTTA AGATCTGGCA ATTTGATGAA GCCATTCACT GTGTGGCTTG GAATCCTCTT TTCGGCTTTC CGATTTTAGC CATTGCCATG GGACGAGATT TGGTTATCAT TAACACTGAA CTTGGTACTG ATGTGGAACA GAAAAATATT GAAGAGCTGC TTCACTTAGG AAACGTTCCA GAACCAAATG CATCTGTTGC AGCAATTGCA AGATGGCTTC CAGATGAGAA ATATGGAGGA ATCATGATTA GACATTTTAA GAACATATCC AGTATTGACT GGCATCGTAA GGGAGACTAT ATGTCGACAG TCATGGCATC CGGCGAAACA CGAGGTGTTG TAATTCATCA AATCTCGAAA AAGCTTACAC AAAAGCCATT CAAGATCTGT GGACTTCCAG TGACTGCTCT TTTTCATCCT AGCCTTTCAT ACTTCTTCAT CGCGACAAGA AAGAACGTGC ATGTTTACAA TCTGTTAAAG GTAGATGAGC CCGTAAAAAA GCTGGAAACT AGAATGAGGG AAATCTCATC AATGGCGATT CATCCTGGTG GTGATAATCT GATAGTAGGA AACAGAGGGA AGATGTGTTG GTTTGACATG GATCTTTCTT CGAAGCCGTA CAAGACTCTC AAGAATCATC CTAAGGACAT TACTAATGCG GCGTTTCACC GTGCGTATCC GTTGTTTGCT TCGTCCTCGG AGGACTCAAC AGCTTTTGTG TTCCATGGAA AGGTGTATAA TGATCTGAAG GAGAATCCTC TGATTGTGCC GTTAGAGATT CTAAGAGGCC ATTCTACTTC TTCAAATGGG GGAGGTGTCT TGGACTGCAA GTTTCATCCA AGACAACCAT GGCTATTCAC TGCAGGGGCT GACTCAGTTA TAAAACTCTA TTGCCACTAA 
Length2520
Protein Sequence
Protein Residue
Map Locationscaffold_7: 8163411.. 8164002
Download Sequence
A.thaliana
AGI-codeAT2G40360.1
DescriptionTransducin/WD40 repeat-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3 Ahg924591 GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative
4.89898 Ahg493117 tRNA/rRNA methyltransferase (SpoU) family protein
9.38083 Ahg473247
11.225 Ahg313639 nuclear RNA polymerase A2
11.225 Ahg358310 glycine-rich RNA-binding protein 3
12.3288 Ahg898803 eukaryotic translation initiation factor 3C
17.8885 Ahg893605 AAA-type ATPase family protein
19.4422 Ahg492111 HIS HF
19.7484 Ahg470196 Tetratricopeptide repeat (TPR)-like superfamily protein
20.199 Ahg470695 P-loop containing nucleoside triphosphate hydrolases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression