Detail



ID : Ahg950765

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950765|scaffold_802652.1
Sequence
CTCTTCCATT TGATCTATTC ACAGATGGAG ACCCATATGG CTGCAGCGGC ATGTGATACG CCTTTCAATT TCTTGAAGAG GGGTTCAGAC CATCTTACTA ACCGGCATGC CCTTCCTTCT GCGTTCTTTT CACCCCATGA GAGTAAGATC GGGGCATTGG CTGAGAAGGA AACCCCACCA ATCGTACTTC AATTCGCTCC ATTGAACAGT TCCGTCTACG AAGGTTTCTG GTATAGCTTC TCGTCTTTGA AACTTGATAA ACTCGGAATC GATGATTCTC CGATTCCAAT CACCGGAAGA AGCCATTGGA GGAAAGATCA AGACTTTGCA AAGCTGGGAG AGTTATACTT CTTTGGATTT CGCCGGAGAG ATCATTAGAA CTCAAATCAA GAGTCTAT 
Length398
Protein Sequence
Protein Residue
Map Locationscaffold_8: 18213182.. 18214320
Download Sequence
A.thaliana
AGI-codeAT5G45900.1
DescriptionThiF family protein
TAIR curator summaryComponent of autophagy conjugation pathway. Required for proper senescence.
Alias[APG7][ATAPG7][ATATG7][ATG7][AUTOPHAGY 7][AUTOPHAGY-RELATED 7]
Gene coexpression
MR
MR Locus Description
21.2603 Ahg491636 Wall-associated kinase family protein
24.2899 Ahg479747
32.6343 Ahg332703
48.7442 Ahg915161
58.0689 Ahg474743 F-box family protein-related
61.441 Ahg917508 cyclic nucleotide gated channel 5
61.7657 Ahg923514 Cation efflux family protein
62.8013 Ahg890967 other RNA
67.7643 Ahg934699 F-box family protein
76.0263 Ahg908642 Pectin lyase-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression