| Annotation |
|---|
| Description | jgi|Araly1|950858|scaffold_802745.1 |
| Sequence |
ACTTGTCTCA TCTCCCGGTT ATGGCTATGG CCGGAGAATC TTCCGGCAAA AAGTGTGGAG ACGGCGACGG TAGAGTCGCC GGGAAAAGCC AGCGAAAGGT GGGTCTTATT TACGACGAGG CGATGTGCAA ACACGACACA CCTGACGGCG AGGATCACCC TGAGTGTCCC GATCGCATCA GAGTTATCTG GGAGAAGCTT CAGCTCGCCG GAGTTTCTCA AAGATGTGTG CTTCTTGGTA GTAGCAAAGC GGAAGATAAG CATCTCCAAT TGGTTCACAC AAAGGACCAT GTTAATTTAG TTAAGAGTAT TAGTACAAAA CAGAAAGATT ATCAGCGAAA CAGGATTGCT TCACAGTTGA ATTCGATTTA TCTGAACAGA GGTTCATCTG AAGCAGCATA TCTTGCAGCT GGATCTGTTG TAAAGGTGGC AGAGAAAGTT GCAGAAGGAG AGTTAGATTG TGGTTATGCT ATTGTCAGGC CCCCAGGGCA CCATGCTGAG GCAGATGAAG CAATGGGGTT TTGTTTATTC AACAATATAG CCGTCGCTTC TAGTTATTTA CTTAACGAAA GACCGGATCT AGGGGTCAAA AAAATTCTGA TCGTTGATTG GGATGTCCAT CACGGAAATG GTACACAGAA GATGTTCTGG GAAGATCCTC GTGTGCTATT TTTCTCAGTT CATAGGCATG AGTATGGGAG TTTCTATCCA GCGGGTGATG ATGGAGATTA TAACATGGTT GGGGAAGGTC CAGGTGAAGG GTTTAACATA AATGTTCCAT GGGATCAAGG ACGATGCGGA GATGCAGATT ATCTTGCTGC ATGGGACCAT ATCTTGATTC CTGTGGCGAG GGAATTTAAC CCGGATATTA TTTTGCTTTC AGCTGGATTT GATGCAGCTA TTGGTGATCC GCTCGGGGGT TGTCGTGTGA CCCCATATGG ATATTCAGTT ATGTTGAAGA AGCTGATGGA GTTTGCACAT GGAAAGATTG TGATGGTGTT AGAGGGAGGG TACAATCTTG ACTCAGTTGC AAAGTCTTCA CTTGCATGTG TCCAAGTTTT GCTTGGAGAC AAACAAATTC ATGGTTCTTC TGAAGCATAC CCATTTGAGT CTACATGGCG TGTCATACAA GCGGTACGCA AGAGGCTATG CGCATATTGG CCTTCACTTG CAGATGAATT ATCGTGGAAT CTGATTAATC AGAAAACTCC TACTCCAGTT ATCCTTATCT CAAGCTCCGA CTCTGAAAAT GAAGATGACC CCCATGGACT CCTGGATCAA ATGTCGAAAC TCAGCATTGA AAACCACCAA GGTACACTAC TTGAAAACCA CCAAGTAGAT ACTGCATCTA CATCTTGGAG AGCTGATCTC GCTAAGGTTG ACGTTTGGTA TGCCTCTTTT GGATCAAACA TGTGGAAACC GAGGTTTCTT TGCTATATTC AAGGGGGACA GGTCGATGGA ATGAAAAAGA CATGTGTTGG CTCAATGGAT AAAAGTCCAC CAAAGGAAGT AGTGTGGGAA ACATTTCCAC ATAGATTGTT CTTTGGCCGT GAATCTTCAG TTGGTTGGGG TGTAGGAGGA GTTGCTTTCA CCAACCCCCT TGCTAATCTC ATTGATCAAA CTCACATGTG TTTGTACCGA ATCACGCTTG AGCAGTTCAA CGACGTTCTG TCTCAAGAAA ATGGCTTGAA TGTAGATTCA GATTCTCCGG TCTTTGATCT AGCTTCTTTG CAGTTAGTAG AGAACAAAGG ATCCATTTTA GAAGCTGCTT TGAATAGTTG GTATGGAAAT GTTGTCTGCT TGGGGAAAGA ACACGACATT CCTATACTTA CAATGACATG CACGCTTTCT GCTGTTGAGA AGTTCAAATC CGGTGAGGTC CCTCTAAGAC CTCCTGCAAA AGCCTATGCC AACACTTTAA TAAGAGGACT TGTGGAAGGA GGAAGATTCT CTAAAGAAGA AGCTGAGGCT TACATAGACA ATGCTGTGTC TAAGCCTCTC TAGTGTATTA TTTACTCAGA AAC |
| Length | 2023 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 18642863.. 18646648 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G61060.2 |
| Description | histone deacetylase 5 |
| TAIR curator summary | Encodes a member of the histone deacetylase family. |
| Alias | [ATHDA5][HDA05][HDA5][histone deacetylase 5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3 |
Ahg920678 | myosin 1 |
| 5.2915 |
Ahg488339 | golgi alpha-mannosidase II |
| 8.83176 |
Ahg494464 | RNAse THREE-like protein 3 |
| 10.3923 |
Ahg473508 | ATP-dependent Clp protease |
| 10.583 |
Ahg495929 | transthyretin-like protein |
| 10.583 |
Ahg480549 | multimeric translocon complex in the outer envelope membrane 132 |
| 11.225 |
Ahg946955 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein |
| 11.6619 |
Ahg950166 | co-factor for nitrate, reductase and xanthine dehydrogenase 5 |
| 12.6095 |
Ahg919143 | |
| 14.4914 |
Ahg899624 | natural resistance-associated macrophage protein 3 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|