Detail


ID : Ahg952063

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|952063|scaffold_3400007.1
Sequence
TCGTCTCCAT TAATCTCGAC AATGTCGTCC CCAGAAAAGA AGAGGAAGTC GCCGACAAGG AAGACGAAGA AACGTTCGCT TACGCCGTCG CCGGAATCGA CCTCAAATCC ATCACTTCCA GATGATTTGG TAGTGAACAT CTTAGCCCGC GTCTCGAGAT CGTATCACCC AAATCTCTCC TTAGTCTGTA AAAGCTTCCG ATCGATTCTT GCTTCACCGG AGCTTTACCA GACTCGAACC CTCTTAGGCA AAACCGAGAC TTTTCTCTAT GTGTGCTTAC GCTTCCCTGA TGAAGCTAAT CCTCGCTGGT TCACTCTCTA CCGGAAACCT AATCAAAACC TAACTAAGAA GAAGAAGAAG AAGAAGAAGA AAAAAGAGGA TTCAAGTGTT AATCTTTTGG CTCCAACCCC AATTCTCAAC TCTCCTCATG TAGAATGGGC AAGGCTCATT GCTGTTGGTT CTAATCTTTA CGCCATTACC GCAGCCATCG AAGATTCTCC ATGCTCTAAT GTTTGGTACC TTGACTGTCG AACTCACACT TGGCTTGAAG CTCCAAGAAT GCGAATTGCT CACACCAATA GTGAACTTGA TAAGAATGTG TACTTAGCTG GAAGCTCTGA AAATCCATAT TCTTTGAACT GTGTTGAAGT GTACAACACA AAGACTCAAA CTTGGAATCC CGTGCCGCCC CAAAAACGGA AATTCAAGTT CGGAAATATG GAAGGAAAGA TTTACATGAA CCCTGTTCGA GAGAATCCTA GGAAGGTTGT GGCTCTAAAG CCAAAGGTTA TGACATGGGA AGCGGTAGGA TGGGATACGG ATTTGGTTCA GGGTTCTATT TGTATAATAG AGAACATAGC CTATTGTTAT GACCCTAGTG AAAAGTTTAG TTGGATAAAA TTTAACACTG ACGAAGATTG GAGAAGATTA GAGGGTTTAG AAGGGCTACC TAAGTTTGCT AGATATAGTA CTGTTAAATT AGCGGATTAC GGTGGTAAGC TGGTTGTTTT TTGGGACAAG TATGTAGCTG CAACTGGTTA TAAGGAGAAG ATGATTTGGT GTGCAGAGAT TTCGCTTGAA AAGCGCAACA GTGAAGAGAT TTGGGGGAAG GTCGAGTGGT TGGATGCGGT TCTTACAGTC CCTAAGTCTT ATAAATTCGT GTGTGCCAAA TCTGCTTCTG TTTGATAGGT TTGAACGTAT TGAAT
Length1205
Protein Sequence
Protein Residue
Map Locationscaffold_34: 64620.. 65824
Download Sequence
A.thaliana
AGI-codeAT5G48990.1
DescriptionGalactose oxidase/kelch repeat superfamily protein
TAIR curator summaryencodes an F-box protein that interacts with SKP1 and likely to be involved in ubiquitin-mediated protein degradation.
Alias
Gene coexpression
MR
MR Locus Description
68.8041 Ahg351806 Galactose oxidase/kelch repeat superfamily protein
74.8331 Ahg470964 Major facilitator superfamily protein
80.3119 Ahg472970 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
90.1776 Ahg470202 Pentatricopeptide repeat (PPR) superfamily protein
90.8955 Ahg925156
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression