Detail



ID : Ahg311450

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|311450|fgenesh1_pm.C_scaffold_1000230
Sequence
ATGGTTGGAT TTCCCCCTAA TCCAGCTATA ACAGTTAAAG AAGAGCTAGC TTTGCAAGTT GTAGTCGATC AAGACCCCAA GGTAAAAACT TTCAAGGACT CTATCGATTT CCCCTCCATC GATTCCTATC TGGATTTCGA TTCCGTCACT TGGTTGGGGA ATTATCGGAA CGTTGAGGAG TTTAGCATAG AAGATACGGA CTTTGATTTC TTTGAGGACG GAATGGAGAT ACCTCAAGAA GGCGTTGTTA CTGTTAGCGG TGTAATGCGT CCTGAGTCGA TTGAAGTAAA GCCTGAGCTT TGTGATGACA TGTCTGGGGA AGTTGGTGTG AGTTTGGTTA GGTCTGAGCC GATGGTTGAA GTAAAGCCTG TGCTTTGTGA TGTCATGTCT GAGGAAGTTG GAGTGAGCTC AATTAAGTCT GAGTCGTTGG TTGAGGTAGA GCCCAATGTT TGTGTTGACA TGTCTGCAAA CGGTGGGGAT GAACCAGCAG TGAAAGATTC AGAACCGGTT GTTTCTGAAA ACTCTAGGTC AATGGAAGGT GAGACTGAGC CAGTTGTTGT GTCTGTTCCT TGTCCCACCA TGGATTTGGA TGAATCAGGG TTGAAGAAAA CAGATGAGAG TTTGGCTTGT TCTATTGAAG TAGGGTTGAA GAAGGTAAGT TTGGCCATGG ATGATGATGA GAAGAGTGAT GGGGATAAGG GAAAAATTGA TTCTGCTGAG TCTGACAGTG AAACCTCGAG CTCTTCTTCA AGCAGTAGTG ATAGTAGTAG CAGTGAAGAA GAGGAGAGTG ATGAGGATGA GAGCGACGAA GAGGAAAAGA AGAAGGAAGA AAAGTTTGAA GATCACATGG TTATGGGGAA AGAGGATGAT TTAGCAGGGG AACTTGAAGA GGGTGAGATA GAGAATTTAG ATGAGGAGAA TGGGGATGAC GAAATTGAGG ATGACGAAGA TGATGATGCT GATGATGACG ATGATGAAGC GATGGTTGCT TGGAGCAATG ATGAGGATGA TGACCTCGGT TTACAAACAA AAGAACCTAT AAGGTCAAAG AATGAGCTCA AGGAGCTTCC TCCAGTTCCA GCTGTGGATG TCACTCTGGA ACCACATCAT GCCACACTTC CTGTTGGAGT TGTTCTTTCG GTAATGAGCA AACAAGTAAT AGTTGAGGGA ATGGAAAAGC ATAGTCCTTT GACTGAAGGT TCTATCCTTT GGGTAACTGA AAAAAGAACG CCATTGGGAC TGGTGGATGA GATCTTTGGA CCAGTAAAGT GCCCTTTCTA TATTGTGAGG TTCAATTCAG AGAGTGAAGT GCCAGAAGGG GTTAGTCAAG GGACACCTGT CTCATTTGTC GCCGATTTCG CTCAACATAT TCTCAATATC AAGGAACTGC AGAAGAAAGG TTACGATGCA TCTGGTGATA ACGACGAGGA GATACCAGAC GAGCTAGAGT TCTCAGATGA TGAAAAAGAA GCCGAATACA GAAGAATGCA GAAGATGGAA AAGAGAGGAA TGATGATTGA CCAGAAAACG GGTAACACAA GGAACAAGAA GAAGAAAAAC CGAGATCTCG GAAGGCCTAC CAGCAGTTAC TCAGGGGAAT GGACAGAGAA CCAGGGATCT AGTTCCCTAT CCTCAAACCG TTCTGATCCT CAAATGGGTG GTCCGCTTTC AAATCTTGGT CCGCGTCCTC AAACGGACGG TTTTCCTCCA AACAATGCAG CATGGCGGCC CCAGAGTAAT CAGCAGAACC CATATCAGCT TCCTCCTATA CCTAATCAGA TGGGAATGCC CAATCTAGCC CCAATGCAGA TACCTTTCAT GGCAATGCAA AATCAAAATC AAATGATGTT CCAACCGCAG TTCAATGGTG GCCAGATGCC AATGCCAGGT GGACCTGGAG GCTTAAACTT CTTTCCAGGA CAGGCTTCAG CGCCATGGCC TGCATTGGTT GGTCAGAATT GTTTCAACCA ACCATTTGGG ATGGGTCGCG GTATTCAGCA GCAGCCATTA CCAAATGAGC TGAGTTTTAA TCTGTTTTCT CAAGGTCTTC AAATGCACCC GCCACAGTCC CAAATGCACC GGCCACAGTC TCAAATGAAT CCACATTTCC AAATGCCACC ACAGTTCCAA ACCAACCCGC AATCTCCAAT GAACCCGCAG TACCAAATGA TGCATCGACC ACAGTCTCCA ATGAACCCGC AGTTCCAAAT GCAACCACAA TCTGATGTGC GACCACCACA GTCACAAATC CCGCAGTCCC CAACAAATCT GCAGTCCCCA ATGGAATCAC AGTCTCAAGG GTTTAGCAGC GGGCAGTCTT CTGAACGGGG AAGGGGCTTC CGTGGTCGTG GGAGGGGTAG GGGTCGGGGT CGCTCCGGAC GTGGGCGAGG TCGAGGCCGG CAACAGTCTG GATGA 
Length2415
Protein Sequence
Protein Residue
Map Locationscaffold_1: 987711.. 990362
Download Sequence
A.thaliana
AGI-codeAT1G03530.1
Descriptionnuclear assembly factor 1
TAIR curator summary
Alias[ATNAF1][NAF1][nuclear assembly factor 1]
Gene coexpression
MR
MR Locus Description
9.48683 Ahg496142 nuclear RNA polymerase C1
9.59166 Ahg470642 Ribosomal protein S5/Elongation factor G/III/V family protein
14.8324 Ahg890991 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
16.9706 Ahg470695 P-loop containing nucleoside triphosphate hydrolases superfamily protein
17.3205 Ahg492425 EMBRYO DEFECTIVE 140
18.5203 Ahg348499 Concanavalin A-like lectin family protein
20.3961 Ahg950851 DEA(D/H)-box RNA helicase family protein
22.6274 Ahg348567 dentin sialophosphoprotein-related
24 Ahg317013 Ribosome recycling factor
24.5357 Ahg319075
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression