Detail


ID : Ahg488429

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488429|fgenesh2_kg.6__1563__AT5G15840.1
Sequence
ATTAGCCCCT TCTTTCAGAT ACAATCTCCC ACACCATCAA ACTTACTACA CCTGAGTTAT TATGTTGAAA CAAGAGAGTA ACGACATTGG TAGTGAAGAG AACAACAGGG CACGAGCCTG TGACACATGC CGGTCAAACG CCTGCACCGT GTACTGCCAT GCGGATTCTG CCTACTTGTG CATGAGCTGT GATGCTCAAG TTCACTCTGC CAATCGTGTT GCTTCCCGCC ATAAACGGGT TCGGGTCTGC GAGTCATGTG AGCGTGCTCC GGCTGCTTTT TTGTGTGAGG CAGATGATGC ATCTCTATGC ACAGCCTGTG ATTCAGAGGT TCATTCTGCA AACCCACTTT CTAGACGCCA TCAGCGAGTT CCAATCCTGC CAATTTCTGG AAACTCTTTC AGCTCCATGG CCATTCACCA CCAAAGCGAG ACAACAATGA CCGATCCAGA GAAGAGACTG GTGGTGGATC AAGAGAAAGG TGAAGAAGGT GATGAGGATG CCAAGGAGGT GGCTTCGTGG CTGTTCCCTA ACTCAGACAA AAATATCAAT AACCAGAACA ATGGGTTATT GTTTAGTGAT GAGTATCTAG ACCTTGTGGA TTACAACTCA AGTATGGACT ACAAATTCAC AGGTCAATAC CATCAACACC AGCAAAACTG CGGCGTACCA CAGACGAGCT ACGGGGGAGA TGGAGTTGTT CCGCTTCAAC TTGAAGAATC AAGGGGCCAC CAGTGCCATA ACCAACAGAA TTTTCAGTTC GATATCAAAT ATGACTCCTC AGGAAGTCAC TACAACGACA ACTGTTCCCT TAACCATAAC GTATACATTT TATCTATGGA AACTGGCGTT GTGCCGGAGT CAACAGCACG TGACAAAACA GCTTCACACC CAAGAACGCC GAAAAAGACG ACAGACCAAC TACCTGACCC TCCAATTCAG ATGATAACCC AACTTAGTCC AATGGACAGA GAAGCCAGGG TCCTGAGATA CAGAGAGAAG AAGAAGACAA GGAAATTTGA GAAGACAATA AGGTATGCTT CAAGGAAGGC ATATGCAGAG ATAAGACCGC GGGTCAATGG CCGGTTCGCA AAGAGGAGAG AAATCGAAGC CGAGGACCAA GTGTTCAACA CAATGCTGAT GTACGACACA GGATATGGCA TTGTTCCTTC ATGCTGATAC TCCTATGGCA AAAATAAAGA CTAGATTGCA AGCTGTAAAT TACTTTTTAG TTTGAGATTC TGTTAGGTTT GGTGAAATTC GTAGCTTCAA TGATTATTAC TACTGTTATG CAAATGGGTC TATAGTTTTG GCTAATTAAT ACTATAGTAT TCCTCTTTC
Length1339
Protein Sequence
Protein Residue
Map Locationscaffold_6: 6191350.. 6192935
Download Sequence
A.thaliana
AGI-codeAT5G15840.1
DescriptionB-box type zinc finger protein with CCT domain
TAIR curator summaryEncodes a protein showing similarities to zinc finger transcription factors, involved in regulation of flowering under long days. Acts upstream of FT and SOC1.
Alias[BBX1][CO][FG][B-box domain protein 1][CONSTANS]
Gene coexpression
MR
MR Locus Description
3.31662 Ahg947216 Carbohydrate-binding X8 domain superfamily protein
4.89898 Ahg474806 nicotianamine synthase 4
5.91608 Ahg313311 Dof-type zinc finger DNA-binding family protein
6.9282 Ahg915887 Cysteine/Histidine-rich C1 domain family protein
7.34847 Ahg493689 Homeodomain-like superfamily protein
10.3923 Ahg908145
10.4881 Ahg939386 Thioredoxin superfamily protein
11.9164 Ahg950326
12 Ahg946685
16.2481 Ahg495722 expansin A14
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression