Detail



ID : Ahg317848

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|317848|fgenesh1_pm.C_scaffold_3000864
Sequence
ATGGGTCGCG AATCTCTGGC TGTTGTGTCC TCGCCGCCAT CGGCAACTGC GCCGAGTACT GCTGTGTCGG CGACCTCGCT TGCTCCTGGC TTTCGATTTC ATCCGACTGA TGAGGAACTC GTGAGCTATT ACTTGAAGAG GAAGGTTCTG GGCAAACCTG TACGCTTCGA TGCGATTGGA GAGGTCGATA TCTACAAGCA TGAGCCCTGG GATTTAGCAG TGTTTTCCAA GTTGAAAACT CGGGACCAAG AATGGTACTT CTTTAGCGCG TTAGATAAGA AGTACGGTAA TGGTGCTAGG ATGAATCGAG CAACTAACAA AGGGTACTGG AAAGCAACTG GAAAAGACAG AGAAATCCGC CGGGATATTC AGTTGCTCGG TATGAAAAAG ACGCTTGTTT TCCACAGCGG GCGTGCTCCA GACGGGCTTC GGACTAATTG GGTGATGCAC GAGTATCGAC TTGTGGAATA TGAAACTGAA ACTAACGGAA GCCTGCTGCA GGATGCATAT GTGTTGTGCA GAGTGTTTCA CAAGAATAAC ATTGGGCCAC CGAGTGGGAA CAGATATGCG CCATTCATGG AAGAAGAATG GGCTGATGGT GGAGGAGCTC TGATTCCAGG AATAGACGTT AGGGTCAGGG TAGAGGCTCT ACCACAAGCC AATGGAAACA ACCAGATGGA CCAGGAAATC CATTCAACAA GCAAGGATCT CATTAACATC AACGAGCTAC CGAGAGATGC TACTCCAATG GACATCGAAC CTAACCAACA GAATCATCAT GAGAGCGCCT TCAAGCCACA GGAGAATAAC AACCATAGCG GTTATGAAGA AGATGAGGAA ACACTCAAAC GCGAGCACAC AGAAGAAGAT GAGCGTCCTC CTCCACTCTC CATTCTCAAC AAAGAAGCTC CACTACCTCT CCTCCAATAC AAACGTAGAC GCCAAAACGA ATCCAACAAC AACTCAAGCA GGAGCACACA GGACCATTGT TCGTCGTCCA CAATAACAAC CGTCGACAAT ACAACCACCT TAATCTCATC ATCATCTGCT GCTGCTGCCA CCAACACTGC CATCTCTGCA TTGCTTGAGT TCTCACTTAT GGGCATCTCC GAAAAGAAAG AAAACCAGCA GCAACCGCTT AGTCCTCACA AGGAAGCTTC TCCTCCTAGT CCAATTGCAT CTCCTGAAGA GAAGGTTGAT GATCTCCAGA AAGAGATTCA CCAGATGTCT GTTGAAAGAG AAACTTTCAA GCTTGAGATG ATGAGTGCAG AGGCTATGAT CAGCATTCTC CAGTCAAGGA TCGATGCACT GCGTCAGGAG AACGAGGAAC TTAAGAAGAA GAACGCCAGT GGACAAGCTA GTTAA 
Length1365
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3941924.. 3944276
Download Sequence
A.thaliana
AGI-codeAT3G10490.2
DescriptionNAC domain containing protein 52
TAIR curator summary
Alias[ANAC051][ANAC052][NAC052][Arabidopsis NAC domain containing protein 51][NAC domain containing protein 52]
Gene coexpression
MR
MR Locus Description
6.9282 Ahg344719 CCCH-type zinc fingerfamily protein with RNA-binding domain
12.1244 Ahg923452
16.7332 Ahg472063 actin-related protein 4
19.7484 Ahg486231
24.0416 Ahg936241 Protein of unknown function, DUF617
26 Ahg496587 chromatin remodeling 24
26.2107 Ahg496632 GTP cyclohydrolase II
27.3496 Ahg478983 Leucine-rich repeat (LRR) family protein
29.6648 Ahg943680 UBX domain-containing protein
30.1496 Ahg494672 COP1-interacting protein-related
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression