| Annotation |
|---|
| Description | jgi|Araly1|472063|fgenesh2_kg.1__2017__AT1G18450.1 |
| Sequence |
CCGAGATTAC AGAGAACCCC GTCCCGTGTT TAAACCCTCC GACGACAAGC TCAGATAGAG AACCTCTCCA CGCTTTTCGT TCGCTGCAGC CATGTACGGC GGAGATGAAG TGTCAGCTAT TGTGGTTGAC TTGGGTTCGC ACACTTGCAA GGCTGGTTAC GCCGGAGAAG ATGCTCCCAA GGCCGTTTTC CCTTCCGTTG TTGGGGCAGT AGATGGTATA GAGGCAATGG ATGTGGATGC TGTTTCTACA AAGACTAATT CGAATTCTGA GGATTCGAAG ACTGAGTCTG AAAAAGAAAA GGGCAAACGC AAGCTCTATG TAGGATCTCA AGCCATGAGT TACCGCCGAG ATCATATGGA GGTTTTGTCA CCTATAAAAG ACGGCATAGT TTCTGACTGG GATTTGGTGG ACAATATATG GGAACATGCT TTCAAGAGTT GTCTGATGAT TGATCCTACG GAGCATCCAA TGCTGCTAGC TGAGCCTCCT TTAAACACTC AACAGCAGAG AGAGAAGGCG GCAGAGCTAA TGTTTGAAAA ATACAAAGTT CCTGCATTGT TTATGGCTAA GAATCCTGTT CTCACGTCTT TTGCTACTGG GCGCGCTACT TCTTTGGTTG TTGACTGCGG TGGAGGATCC ACAACTATTT CACCTGTGCA TGATGGTTAT GTTCTTCAAA AGGCTGTTGT ATCATCTCCA CTTGGAGGGG AATTTCTCAC TGACTGCCTA CTGAAAAGCT TGGAGAGTAA AGGAATTAAA ATAAGACCTA GATACTCTTT CAAGAGAAAG GAAATACGAG CAGGGGAATT CCAGGTTGAA GATGTGGATA TTCCGGACAC CACGGAAAGC TACAAACTCT TCTGCCAGAG GATGATAGTG GGTGATATCA AGGATTCTAT TTGTCGAGTT CCTGATACTC CCTATGATGA TAAATCATAT TCAAACATCC CAACTACGTC GTACGAGCTT CCTGATGGCC AGACGCTCGA GATTGGTGCT GATAGGTTCA AAGTTCCTGA TGTGATGTTC AACCCATCCA TAGTCCAGAC GATTCCTGGA ATGGAGAAGT ATGCTGATAT GATTCCTTCC GTTCGTGGGT TACCACACAT GGTCATGGAG AGCATCAACA AATGTGATGT AGACATCCGG AGAGAGTTGT ATAGTAGCAT ACTGCTTGCT GGTGGCACAT CGTCAATGCA ACAATTGAAA GAACGTCTCG AAAAGGACTT GATCGAAGAG TCTCCTCACT CGGCTAGAGT TAAAGTGTTG GCAAGCGGTA ACACAACAGA AAGAAGATTC AGTGTATGGA TAGGAGGGAG TATATTGGCA TCACTAGGCT CATTTCAACA GATGTGGTTC TCCAAGTCTG AGTATGAGGA ACATGGAGCT TCCTACATTC AGAGAAAATG CCCTTAAAGC AGAAACTAAT GTGTTATTTT CATTGTTCAT TAACAAGCAG TTTAGTGCT |
| Length | 1469 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 7375792.. 7379658 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G18450.1 |
| Description | actin-related protein 4 |
| TAIR curator summary | Encodes a gene similar to actin-related proteins in other organisms. Member of nuclear ARP family of genes. Component of chromatin remodeling complexes, involved in chromatin-mediated gene regulation. Phenotype of the arp4-1 mutant allele revealed partial sterility due to defects in anther development. Targeting the distinct, 3' UTR of AtARP4 transcripts with RNA interference caused a drastic reduction in the level of AtARP4 protein expression, and resulted in strong pleiotropic phenotypes such as altered organization of plant organs, early flowering, delayed flower senescence and high levels of sterility. Western blot analysis and immunolabelling demonstrated a clear correlation between reductions in the level of AtARP4 expression and severity of the phenotypes. |
| Alias | [ARP4][ATARP4][actin-related protein 4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.24264 |
Ahg482750 | ARF-GAP domain 7 |
| 4.89898 |
Ahg935024 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 5.2915 |
Ahg927472 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 5.47723 |
Ahg919553 | DNA ligase 1 |
| 6.32456 |
Ahg470815 | ribosomal protein L29 family protein |
| 7.2111 |
Ahg906831 | chromatin remodeling 8 |
| 10.5357 |
Ahg483634 | Translation elongation factor EFG/EF2 protein |
| 15.8745 |
Ahg487419 | splicing factor-related |
| 16.7332 |
Ahg317848 | NAC domain containing protein 52 |
| 17.7482 |
Ahg475153 | Chaperone DnaJ-domain superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
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| The four seasons |
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| Growth Chamber expression |
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