| Annotation |
|---|
| Description | jgi|Araly1|483923|fgenesh2_kg.4__2983__AT2G47460.1 |
| Sequence |
ACTCAGTAAC TTCTCTTTCT CACTTACACA CTCTCTCTCT CTCTCTTTCC GTTGCTTGAC TTTGTGGTCA GCGTAATAAA TACATATAAC CGCCGTAGAA AATGGGCAGA GCGCCGTGTT GCGAGAAGGT CGGTATTAAG AGAGGGCGGT GGACGGCGGA GGAGGACCAG ATTCTCTCCA ACTACATTCA ATCCAACGGC GAAGGATCTT GGAGATCTCT CCCCAAAAAT GCCGGATTAA AAAGGTGTGG AAAGAGCTGT AGGTTGAGAT GGATAAACTA TCTTAGATCC GACCTCAAGC GTGGGAACAT AACTCCAGAA GAAGAAGAAC TCGTTGTTAA ATTGCATTCC ACTTTGGGAA ACAGGTGGTC ACTAATTGCG GGTCATCTTC CAGGGAGAAC AGACAACGAA ATAAAAAATT ATTGGAACTC TCATCTCAGC CGTAAACTCC ACAACTTTAT TAGGAAGCCG TCCATCTCTC AAGACGTCTC CGCCGTAATC ATGAACGCTT CTTCAGCGCC ACCGCAGCCG CAGGCAAAAC GCAGACTCGG GAGAACAAGT AGATCCGCCA TGAAACCAAA AATCCACAGA ACAAAAACTC GAAAAACAAA GAAAACGTCT GCACCGCCCG AGCCTAAAGC CGACGTAGCG GTGGCTGAGG AAGGAGCATT AATGGTGGAG TTAAGTGGAG CCGAGGCTGA GCTAGGACCA TGTGACTACT ATGGAGATGA TTGTAATAAA AATCTCATGA GCATTAATGG CGATAATGGA GTTTTAACGT TTGATGATGA CATCATCGAT CTTTTGTTGG ACGAGTCAGA TCCTGGCGAC TTGTACACAA CGTGCGGTGG TGATGGGGAG TTGAATAACA TGAGAGACTC TGAAGGAGCC AGAGGGTTCT CGGAGACTTC GAACCAAGGG AGTCTCGACT GTCTTCTTCA GTCGTGTCCA TCGGTGGAGT CGTTTCTCAA CTATGACCAC CAAGTTAACG ATGCGTCAAC GGATGAGTTT ATCGATTGGG ATTGTGTTTG GCAAGAAGGT AGTGATAATA ATATTTGGCA TGAGAAAGAG AGTCCCGACT CAATGGTGTC GTGGCTTTTG GACGGTGATG ATGAGGCCAC GATCGGGAAA AGTAATTGTC AGAACTTCGG AGAACCGTTG GATCATGACG ACGAAAACGC TTTGGTCGCT TGGCTTCTGT CTTGATGATA TTGATTGATC CGTTAAGTAA TCTTTTTTTT TTTGTGTATT CACAGTTTGA ATCTATTCCA CGTCGCATCA TATCTTAAAG TTTAGGATCT AAATATTAGT CCATTAGTTA GAATTATATG TATAATGCAA TAAAACTCAT GGGATGCTTG TATT |
| Length | 1364 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 21867338.. 21871334 |
| Download Sequence |
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| A.thaliana |
|---|
| AGI-code | AT2G47460.1 |
| Description | myb domain protein 12 |
| TAIR curator summary | "MYB12 belongs to subgroup 7 of the R2R3-MYB family. It strongly activates the promoters of chalcone synthase (CHS), flavanone 3-hydroxylase (F3H), flavonol synthase (FLS) and - to a lesser extent - chalcone flavanone isomerase (CHI), but cannot activate the promoters of flavonoid-3'hydroxylase (F3'H) and dihydroflavonol 4-reductase (DF). The activation requires a functional MYB recognition element (MRE). Results from the myb12-1f allele indicate that an activation domain might be present in the C-terminus. Overexpression or knock-out plants do not show any obvious phenotype under greenhouse conditions. Young myb12-ko seedlings contain reduced amounts of flavonoids (quercetin and kaempferol), while seedlings as well as leaves of MYB12-OX plants displayed an increased flavonoid content. They did not show any significant difference in anthocyanin content. Expression of CHS and FLS shows a clear correlation to MYB12 expression levels. CHI and F3H show increased transcript levels in the MYB12-OX lines, but no differences in the knock-out. Even in the absence of functional MYB12, flavonol biosynthesis is not completely absent, suggesting functional redundancy. " The redundant factors are MYB11 and MYB111 although MYB12 is primarily required for flavonol biosynthesis in roots. |
| Alias | [ATMYB12][MYB12][PFG1][MYB DOMAIN PROTEIN 12][myb domain protein 12][PRODUCTION OF FLAVONOL GLYCOSIDES 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg949426 | myb domain protein 111 |
| 3.87298 |
Ahg495294 | Transducin/WD40 repeat-like superfamily protein |
| 4.24264 |
Ahg940600 | Basic-leucine zipper (bZIP) transcription factor family protein |
| 4.89898 |
Ahg470636 | myb domain protein 13 |
| 7.61577 |
Ahg485476 | flavanone 3-hydroxylase |
| 10.6771 |
Ahg487705 | flavonol synthase 1 |
| 11.0454 |
Ahg481442 | ataurora2 |
| 12.0416 |
Ahg315321 | beta glucosidase 4 |
| 12.3288 |
Ahg492036 | UDP-Glycosyltransferase superfamily protein |
| 12.6491 |
Ahg485933 | Chalcone-flavanone isomerase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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