Detail



ID : Ahg497050

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|497050|fgenesh2_kg.9__15__AT4G13345.1
Sequence
AAGAAAGAAA GTGTTTAAAA AGAGCAAAAC TCAGAAGAAA CAACAAAACC TGAAATCATT AATTTTCTTC TTTTTCACAA TTTCCTCTCA GATCTTTTTT GGGGTTTCTC ATTTGTAAGT AAAACCTCTA ATAAGAAACA TTTTTCACAT CTCCAGATCT GATCTTGAGC TTTTGCACCA GCAAAAAAAA AACAAGTTCT TTGTTCTGAA GGAAGACAAG TAAAGGCTTC TGGAGTCTTT CTTGTGTTTA GTCTGGTCCT CCCAAGGATA TTATTTGCCA AGGATCTATG ATCTTCCAAT GTCATGAAGA AGGGAGAGTT TGCTAAGTTT AAAGACTTAT GGAGACCGGT ACAAGCATTG ACAAGAATGG CTATGAAGGA ATAAAGAACG GTTCGTGGTT TAGCCAGTTT CGTAATGGCT GCAATCCATG GATGGCTAGA TATGTGTACG GTCTGATATT CCTCTTGGCA AATTTGTTGG CTTGGGCCTT GCGCGATTAT GGCCGAGGTG CCTTGACCGA GATGAGAAAA TTCAAGAATT GTAAAGAAGG TGGAGAGTGT TTGGGGACGG AAGGAGTTTT ACGAGTAAGC TTGGGATGTT TTTTGTTCTA TTTCATTATG TTTCTTTCAA CCGTTGGCAC ATCAAAGACG AATTCATCGA GAGATAAATG GCATTCAGGA TGGTGGTTTG CTAAGCTTTT CATGTGGCTT GGCTTAACCA TCTTCCCCTT TTTGTTGCCT TCTTCCATTA TTCAGCTTTA CGGGGAGATT GCCCATTTTG GTGCAGGGGT ATTTCTCCTA ATTCAGCTCA TTAGTATCAT TAGTTTCATT ACATGGCTCA ATGAATGCTT CCAAGCACAA AAAGATGCAG AAAGATGCCA TGTCCATGTG ATGCTACTAG CGACTACTGC GTACACCGTA TGCATATTAG GGGTTATTTT GATGTACATT TGGTATGTGC CTGATCCATC ATGCCTTCTC AACATATTTT TCATCACATG GACTTTGTTC CTCATCCAAC TCATGACAAG TATCTCTCTC CACCCCAAAA TAAATGCTGG ATTCTTGACT CCAGCACTTA TGGGGCTTTA TGTTGTGTTT ATCTGCTGGT GCGCCATTCG AAGTGAGCCA GTAGGAGAAA CTTGCAATCG AAAAGCCGAA GGTTCTAGCA GAACAGACTG GCTTACCATC ATAAGCTTTG TTGTTGCACT GGTTGCAATG GTAATTGCGA CATTCTCCAC GGGCGTAGAT TCCCAATGTT TCCAGTTTAG AAAAGATGAG AATCATGAGG AAGATGCAAT TCCTTACGGA TATGGATTCT TCCATTTTGT GTTTGCTACC GGAGCAATGT ACTTTGCGAT GCTACTTGTT GGCTGGAACA TTCATCATTC CATGAAAAAG TGGACCATTG ACGTTGGGTG GACAAGTACT TGGGTAAGGA TAGTGAACGA ATGGCTCGCG GTTGGCGTTT ATATTTGGAT GTTGGTGGCT CCAATGGTAC TGAAAAGTAG ACAAACAACA TGAGAGATCA CTACAGAGAG ATTTTTTCAT CTCGGTATTG TGGATCTTGT CGAAAAATAG AATAGAAGAT TAAGATTGGA TAACTGTGTG AAATCATCAT ATATTTGTAC TTAGATTCTT TAGGATCAAA GAAAGATGGA TACAAATATA GCTATAGATT AGTAATACTG ACCCTAATAG GGTCTCTATT CATGAAGCGT GTACACGTTA TTACACATAC ATCTCTCTA 
Length1749
Protein Sequence
Protein Residue
Map Locationscaffold_9: 319665.. 324586
Download Sequence
A.thaliana
AGI-codeAT4G13345.1
DescriptionSerinc-domain containing serine and sphingolipid biosynthesis protein
TAIR curator summary
Alias[MEE55][maternal effect embryo arrest 55]
Gene coexpression
MR
MR Locus Description
4 Ahg892416 DNAse I-like superfamily protein
11.225 Ahg489795 myb domain protein 6
15.1987 Ahg901619 nodulin MtN21 /EamA-like transporter family protein
15.1987 Ahg950116 HSP20-like chaperones superfamily protein
21.9545 Ahg950486
22 Ahg943663 SAUR-like auxin-responsive protein family
24 Ahg321672 DA1-related protein 2
27.037 Ahg474806 nicotianamine synthase 4
27.4955 Ahg490418 GRAM domain family protein
31.225 Ahg939405 isopentenyltransferase 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression