Detail



ID : Ahg322865

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|322865|fgenesh1_pm.C_scaffold_5000409
Sequence
ATGACACCGG CAACACTAGC TATATTCTTT GTCTCTTTGG TCATTATTGG AACAGCAACC GATGTTGCTC CAGCAACCAA ACAACCGATT GAGTTCTTTC CGAGTTTGCA GGAGCATGAC AAGTCTCTAT TTGTTACTGT GGAAGGCTGC AACAACCATT GCCTAACAGC TTGCTTTGAC TGCAACATAG AGAAACAGCC TCCCGTTTGC GTTCAGTGTT GCCCGATTTG A 
Length231
Protein Sequence
Protein Residue
Map Locationscaffold_5: 3472249.. 3472579
Download Sequence
A.thaliana
AGI-codeAT3G27380.1
Descriptionsuccinate dehydrogenase 2-1
TAIR curator summaryOne of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex, a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion. Expressed during germination and post-germinative growth.
Alias[SDH2-1][succinate dehydrogenase 2-1]
Gene coexpression
MR
MR Locus Description
12.3288 Ahg325294 Late Embryogenesis Abundant 4-5
24.6577 Ahg949566
31.8119 Ahg913808
33.5857 Ahg483960 TSPO(outer membrane tryptophan-rich sensory protein)-related
36.9459 Ahg941255
41.7732 Ahg474276 Protein kinase superfamily protein
64.3195 Ahg889260
69.8427 Ahg491381 Thiamine pyrophosphate dependent pyruvate decarboxylase family protein
69.9714 Ahg491342
70.4982 Ahg921008 cold-regulated 47
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression