Detail



ID : Ahg323091

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|323091|fgenesh1_pm.C_scaffold_5000635
Sequence
ATGCCGAGGC ATAATAAAGA TGAAAAATTT GTTTTTGATG ACGGAGAAGA CGAGGACAGA GAAGATCCAG TATCCATTAA AGTTGTCGAT GGTGAAGATG AAGATGAAGA TGATGATGAA GCTAATGAAG ATCTTAGCTT GAAGATATTA GAGAAAGCAT TATCGAGGCG TGATGTTGGG AACAAGCTTG ATTCTGATCT CTCTGATTCT GGTGTAGTAA ATACTGTGAT GGTTAATGGA GGAAAGTCTA AGGTTAAAAA ATATGAGAGT AATAAGAAGA TGAAGAGAAA TAAGCTTGAA GCTGCCCATG AAATTCCTAT TGTTTGGAAA GACCAAGATG AAGAGAAAGT TGTGGAGGAG GTAGTAAAAG GTGAAGGAGA GGATGATGAG GTTGACAGAT CTGATGAACC GAAAACTGAA GAAACATCTA GCAATTTGGT TCTGAAAAAG CTTCTTCGTG GAGCAAGATA CTTTGACCCT CCTGATGCTG GTTGGGTGAG TTGTTATAGT TGTGGGGAGC AAGGTCATAC AAGTTTCAAT TGTCCAACTC CTACCAAGCG TAGAAAGCCT TGCTTTATAT GTGGGAGTTT GGAACATGGT GCAAAGCAGT GTTCAAAGGG ACATGATTGT TATATATGCA AAAAAGGTGG ACATCGAGCT AAAGATTGTC CCGATAAGTA TAAAAACGGG TCTAAAGGAG CTGTATGTTT AAGATGTGGA GACTTTGGTC ATGACATGAT TTTGTGCAAG TATGAGTACT CTCAGGAAGA TTTGAAGGAT ATACAATGCT ATGTCTGTAA AAGCTTTGGC CATCTATGCT GTGTCGAACC TGGTAATTCA CCGTCATGGG CTGTATCTTG CTACAGATGT GGTCAACTGG GTCATACTGG ACTGGCATGT GGTAGACACT ACGAAGAAAG AAACGAAAAT GATTCTTCCA GCTTAAGCTT TCCAGAAAAC AACAGGGAAG CCAGTGAATG CTATAGGTGT GGGGAAGAAG GGCATTTCGC ACGTGAATGC CCGAATTCGT CGAGCATAAG CACTTCACAG GGCAGAGAGT CACAAAGTTT ATGCTACAGA TGTAATGGAG CAGGACATTT CGCTCGTGAA TGCCCCAATT CCTCCCAGGT TTCTAAGAGG GACCGTGATA CATCTACACC ATCACATAAA TCTCGCAAGA AAAATAAAGA GAACTCGGAA CACGATTCTA CTCCCCATGA ATCCAATGGA AAGACGAAGA AGAAGAAGAA GAAAACACAT AAAGAAGAAC AGCCCCAGAC TTCACCAAGG AAACGAAAAC ACAGAGGCGG TTGGATCACA GAGGAACCGG AAGAAGAATC TTTCCAAAGA GGAAAGACGA GAAGGCCAAA GTCTCCCATT ACACCATCGG GTTATAACAA GTCACCCTCT ACACATATGG GTCATAACTA TAGATCTCCA AAATTCAATT CTGGTGGGCA TTTCCCGGGA TCTCAGTCTA GTAGGCATCA CTCGGGTCCT TCACCATCAA GGTGGCAGCC TTCTTATCCT CCTTCTCATC ATCATCAGCA TCATCATCAT CATCATCATC AGCATCATCA TCATCAGAAT CAAAGTTATG GAACTGCACC ACCAAGGTAT GGCAGAGCTC ACCACTATGG CGAGTTTGCA GGGAACTATG AACGGTGGTA A 
Length1671
Protein Sequence
Protein Residue
Map Locationscaffold_5: 9740386.. 9742875
Download Sequence
A.thaliana
AGI-codeAT3G43590.1
Descriptionzinc knuckle (CCHC-type) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12.9615 Ahg949042 rotamase FKBP 1
14.0712 Ahg476107 senescence associated gene 24
18.9737 Ahg937278 Protein of unknown function, DUF647
25.2982 Ahg489971 eukaryotic translation initiation factor 3A
28.3549 Ahg339148
28.9828 Ahg478459 alfin-like 2
32.3728 Ahg495573 DEA(D/H)-box RNA helicase family protein
34.9857 Ahg942536 Transducin family protein / WD-40 repeat family protein
38 Ahg925800 calmodulin 4
43.3705 Ahg948327 cullin4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression