| Annotation |
|---|
| Description | jgi|Araly1|325766|fgenesh1_pm.C_scaffold_6000986 |
| Sequence |
ATGGATTCCG GTGACGCGAC AGCTTTGCTT TTGGCGAAAA TCCGAAGCTT GGAGCCAGAT TATGCTCCGA AGATTATTGG GTATTTGCTT TTACAGGATT TTGGTGATAG AGACTTGATG CATCTGGCTC GTGGACCTGA ATCGATTTTG CAGTCGATTA TTTCGAAAGT GAAGAGTCAT TTGGGAATTT TCTCGAACAA CTCGCCTTCT TCTACTCCGA CGTCTCCTTC TCCGTTGAAC CCTATCTCTC GACCACCTAT TAACGGTAGA GGAAGCTCTC ACTCTAATGG GTTTATGGAT TTCCGTAGAA ACTCTCCATC TTCTCCTTCT TCTACCTCTC CTTGGTCACT CAACAACTCT ATGAACCCTA TTAATGGGAA TAACCCCCAC ATTTCCCCCA AACACACTCC GATCTCGAAA CCCTTTAGCT CTCACCAAAG CAATGGAGTT TCTGCTACAG ATTCTGGTAG TGCTGACGCT GGTGGTAATG CTGATTTACT GGATGACCAG CAGCTTAATG ATTACCTTTC TTTTCTCGAC GATTCCTGTT CAAAAACCGA GGATCTTGTG GATCCTAGGA TTCCTTTGGA CTACTCTGTA GACGATGGAG AAACCCATCT GCACAGGAGG AGTTTCTCGG CAGATGCGTC TTTTGGGTCC GGAGATGATG GATTTGGTTC TGGATGCAAA CCATGTGTGT ATTTTAGTCG AGGTTTGTGC AAGAACGGAG AAAGCTGCAA GTTTATCCAC GGCGGATATC CGGAGAATAT GGATGGTAAT GGCATTGTCG CTGACTCGCC TAGGAAAATG GAGAACTTTG TTAGGCAGCA CCAGGAGATG ATGAGGTTGA AATTGGCTTA CCAGCAGCAG AGGCTGACTT CTCAAATCCT GGGTAGGGCT CCCCAGTTGC CATACGAGAA AAGAATGGAT TTTCTCTTGC AGCAGCACGC TCAAAGAGAT GGTGGACTGC CTTTTGGTGA TGAAAGATTT TGGAGCAGCA GCCCAGGACG GCTTGAGAGG ATGGAACTAA TGGCAATGCA TTTAGGTGAT CAGTCAAACT CCGCATCTAG ACAGATTTAC TTGACATTCC CAGCTGACAG CACGTTTAAG GATGAGGATG TTGCTACATA TTTCAGCCTT TTTGGAACAG TGCAAGATGT GCGGATCCCA TACCAGCAGA AGCGTATGTT TGGCTTTGTT TCATTTGCTC ATCCTGAGAC AGTGAAAGTT GTACTAGCTA GAGGGAATCC CCATTTCATT TGCGACTCAC GGGTGCTTGT CAAACCTTAC AAAGAAAAAG GCAAAGTCTT GGACAAGAAG CAACAGCAAC TGCTGCAACA GCAGATTGAG CGGGGAAATT ACTCCCCGTG CTCCAGTCCT TCTGGGGTTG ATCCTAGAGA ACAGTCTGAT TTCCACCTTG TAGGTTCGAA GATGCTGTAT GAGAGACGTG AGATGATGAG AAGGAAAATG GAGCAGGCTG ATCTCCTGAG GGCTATTGAA CTCGAAAGAA GACGTTTCAT AAATTTGCAG CTTCCTGAGT TCAAGAATAG TGTAATGCAG AATCATCACC GTAGCTTTTC TGTGGGGTCT CCTGGTTATT TTTCGTCTGC CAGCAACCAA AGCCCTGATT TTCAATCTGA ACTTACAGTT GCAGATGCTT TAGAAGTAGT TGATGATACC TCGGAGCTGC ATCCTTACCC TGTAATCAAC CCAATGAGTG TTAACAATAA TTACTCAAAC GGTGCAAAAG AAGGGACTGA CAAGAGTGAA TTGCTTGAAC CCGATACGGG AAGCACTATA GAGCTTGTTC TTCCCAGTAA CCTGTTCCCT TCTGCATCAT CTACCGATGA TCACAAAACC GATGATTCTG CTGCAACTAA TGCAAAAGTT GGAGTCTCCT GTACTAATGG AAATGACAAT GAACCACCAG TCACTACCAA TAATCTGATG CAGTAG |
| Length | 1956 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 4864571.. 4867286 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G12440.1 |
| Description | CCCH-type zinc fingerfamily protein with RNA-binding domain |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.09902 |
Ahg481704 | ABC-2 type transporter family protein |
| 6.55744 |
Ahg471206 | alpha/beta-Hydrolases superfamily protein |
| 9.16515 |
Ahg496587 | chromatin remodeling 24 |
| 9.64365 |
Ahg483251 | Integrase-type DNA-binding superfamily protein |
| 11.6619 |
Ahg320642 | RNA binding (RRM/RBD/RNP motifs) family protein |
| 14.7648 |
Ahg495190 | Protein of unknown function (DUF3414) |
| 15 |
Ahg486115 | Protein kinase superfamily protein |
| 15.906 |
Ahg471949 | Transcription initiation factor TFIID subunit A |
| 20.2978 |
Ahg480837 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 25.4558 |
Ahg947658 | Ataxia telangiectasia-mutated and RAD3-related |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|