Detail



ID : Ahg889110

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|889110|Al_scaffold_0007_1096
Sequence
ATGGCAGAAG GTGAAGAGGC CAAGAAGAAG AATTTACAGA CAAGTTACTT CGACGTCGTT GGAATCTGCT GTTCATCGGA GGTTTCTATC GTCGGTGACG TTCTCCGTCC ACTTGACGGC GTCAAAGAAT TCTCCGTTAT CCTCCCTTCT AGAACCGTCA TCGTTGTCCA TGACACTTTC TTGATTTCTC CGCTTCAAAT CGTCAAGGCT CTGAATCAAG CAAGACTAGA AGCAAGTGTG AGACCATACG GAGAAACAAG CTTGAAGAGT CAATGGCCAA GTCCTTTTGC AATACTTTCT GGTGTATTTC TTGCTCTCTC CTTCTTCAAA TACTTTTATA GTCTGCTTGA ATGGCTCGCT GTTGTTGCCG TGGTGGCCGG GATTTTCCCC ATCCTTGCTA AAGCTGTTGC TTCGGTCACA AGGTTCAGAC TTGATATCAA CGCTCTCACT TTTATTGCTG TGATAGCAAC ACTATGTATG CAGAATTTCA CAGAAGCTGC CACAATTGTG TTTCTATTCT CAGTTGCAGA TTGGCTAGAG TCTAGTGCTG CTCATAAGGC AAGCACAGTA ATGTCATCAC TGATGAGCTT AGCGCCACGA AAGGCAGTGA TAGCGGAAAC TGGACACGAA GTCGATGTAG ATGAGGTTAG GATCAACACA ATTGTTTCAG TGAAAGCTGG AGAAAGTATA CCGATTGATG GAGTTGTGGT GGATGGAAGC TGTGATGTGG ATGAGAAAAC ATTGACAGGA GAGTCATTCC CTGTCTCCAA ACAGAGAGAT TCAACTGTTT TGGCTGCAAC CATAAATCTT AATGGTTATA TAAAGGTGAA AACTACAGCT CTAGCCCGGG ACTGCGTAGT TGCGAAAATG ACTAAGCTTG TAGAAGAAGC TCAAAAAAGC CAAACCAAAA CTCAAAGGTT TATAGATAAA TGTTCTCGCT ACTACACTCC AGCTGTTGTC GTGTTAGCAG CATGTTTTGC GGTGATCCCG GCATTGTTAA AGCTTCAGGA CCTTAGCCAT TGGTTTCACT TAGCACTTGT AGTGTTAGTA AGTGGTTGTC CATGTGGTCT TATCTTATCC ACACCTGTTG CTACCTTTTG TGCTCTCACT AAGGCAGCCA TGTCGGGGTT TCTGATCAAA ACTGGTGATT GTCTAGAGAC TCTTGCAAAG ATCAAGATTG TTGCTTTTGA CAAAACAGGA ACTATTACAA AGGCTGAGTT CATGGTCTCG GATTTTAGGT CTCTTTCTCA CAATATCAAT CTGCACAACT TGCTTTACTG GGTCTCGAGC ATTGAGAGCA AGTCAAGCCA CCCGATGGCA GCGGCACTTA TTGACTATGC AAGATTAATT TTTGTTGAGC CTAAGCCTGA TCTCGTTGAG AACTTTCAAA ACTTTCCAGG AGAAGGAGTT TATGGGAGAA TAGATGGTCA AGATATCTAC ATTGGAAACA AAAGAATTGC ACAGAGAGCT GGATGCTTAA CAGTTCCGGA TATGGAAGCT AATATGAAGC GAGGTAAGAC CATTGGTTAC ATATACATTG GAGCAAAACT GTCCGGAAGT TTCAACCTTA TGGACGGTTG TCGATATGGG GTTGCTCAAG CTCTCAAGGA GCTTAAGTCT TTAGGAATCA AAACTGCAAT GCTCACAGGA GATAACCGAG ACGCAGCCCT GTCTACTCAA GAACAGTTAG AGAATGCTTT GGATATTGTT CACTCTGAAC TCCTTCCACA AGACAAAGCA AGAATCATCG ATGAATTCAA GATCCAAGGG CCTACAATGA TGGTAGGAGA CGGGCTTAAC GATGCACCGG CTTTAGCGAA AGCAGACATT GGCCTTTCAA TGGGGATCTC AGGGTCAGCA CTTGCAACAG AGACAGGAGA CATCATTCTT ATGTCAAACG ATATAAGGAA GATCCCGAAA GGGATGAGAC TAGCGAAGAG AAGTCATAAG AAAGTGATTG AGAATGTTGT TTTGTCTGTG AGCATAAAAG GAGCAATCAT GGTTCTTGCT TTTGTAGGTT ACCCTCTGGT TTGGGCAGCT GTTCTTGCAG ATGCAGGAAC TTGTTTGCTT GTGATACTCA ATAGTATGAT GCTTCTACGC GATGAGCGTG AAGCCGTGTC TACATGTTAC CGTGCGTCTT CTTCTTCGCC GGTGAAACTT GAGGAGGATG AAGCAGAGGA TCTAGAAGTT GGCTTGTTGC AGAAGAGTGA GGAGACAAGT AAAAAGAGTT GTTGCTCTGG TTGTTGTAGT GGCCCTAAGG ATAATCAACA ATAG 
Length2274
Protein Sequence
Protein Residue
Map Locationscaffold_7: 4639100.. 4642064
Download Sequence
A.thaliana
AGI-codeAT4G30120.1
Descriptionheavy metal atpase 3
TAIR curator summaryencodes a protein similar to Zn-ATPase, a P1B-type ATPases transport zinc
Alias[ATHMA3][HMA3][A. THALIANA HEAVY METAL ATPASE 3][heavy metal atpase 3]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg920472 Inorganic H pyrophosphatase family protein
5.19615 Ahg326886 DEAD box RNA helicase (RH3)
10.3923 Ahg942027 Protein of unknown function (DUF3411)
10.583 Ahg342019 actin 2
11.7047 Ahg495052 pyridoxin (pyrodoxamine) 5'-phosphate oxidase
17.8885 Ahg481465 glycine decarboxylase P-protein 2
19.5959 Ahg945228 Tetratricopeptide repeat (TPR)-like superfamily protein
21.2132 Ahg487877 kinesin like protein for actin based chloroplast movement 1
22.9783 Ahg943476 translocon at the outer envelope membrane of chloroplasts 159
22.9783 Ahg487993 catalytics
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression