Detail



ID : Ahg329048

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|329048|fgenesh1_pm.C_scaffold_7001275
Sequence
ATGGCAGCTA ATGAAGAGTT TACGGGAAAT CTAAAACGCC AACTCGCTAA GCTCTTTGAT GTGTCTCTAA AATTAACGGT TCCTGATGAA CCTAGTGTTG AGCCCTTGGT GGCTGCCTCC GCTCTTGGAA AATTTGGAGA TTACCAATGT AACAATGCAA TGGGACTATG GTCCATAATT AAAGGAAAGG GTACTCAGTT CAAGGGTCCT CCAGCTGTTG GACAGGCCCT TGTTAAGAGT CTCCCTACTT CTGAGATGGT GGAATCATGC TCTGTAGCTG GACCTGGCTT TATTAATGTT GTACTATCAG CTAAGTGGAT GGCTAAGAGT ATTGAAAATA TGCTCATCAA TGGAGTTGAC ACATGGGCAC CTACTCTTTC CGTTAAGAGA GCTGTAGTTG ATTTTTCCTC TCCCAACATT GCAAAAGAAA TGCATGTTGG TCATCTTAGA TCAACTATCA TTGGTGACAC GCTAGCTCGC ATGCTCGAGT ACTCAAATGT TGAAGTTCTA CGCAGAAACC ATGTTGGTGA CTGGGGAACA CAGTTTGGCA TGCTAATTGA GTACCTCTTT GAGAAATTTC CTGATACAGA TAGTGTGACT GAGACAGCAA TTGGAGATCT TCAGGTGTTT TACAAGGCAT CAAAACATAA ATTTGATCTG GATGAGGACT TTAAGGAAAA AGCACAACAG GCTGTGGTCC GTTTACAGGG TGGTGATCCT GTTTACCGTA AGGCTTGGGC TAAGATCTGT GACATCAGCC GAACTGAGTT TGCCAAGGTT TACCAACGCC TTCGAGTTGA GCTTGAAGAA AAGGGAGAAA GCTTTTACAA CCCTTATATT GCTAAAGTAA TTGAGGAATT GAATAGCAAG GGATTGGTTG AAGAAAGTGA AGGTGCTCGT GTGATTTTCC TTGAAGGCTT TGACATCCCA CTCATGGTTG TAAAGAGTGA TGGTGGTTTT AACTATGCCT CAACAGATCT GACTGCTCTT TGGTACCGGC TCAACGAAGA GAAAGCTGAG TGGATTATAT ATGTGACCGA TGTTGGCCAG CAGCAGCACT TTAATATGTT CTTCAAAGCT GCCAGAAAAG CAGGTTGGCT TCCAGACAAT GATAAAACTT ACCCTAGAGT TAACCATGTT GGTTTTGGTC TCGTCCTCGG GGAAGATGGC AAGCGATTTA GAACTCGTGC AACAGATGTA GTCCGCCTAG TTGATTTGTT AGATGAGGCC AAGACTCGCA GTAAACTTGC CCTTATTGAG CGCGGCAAGG ACAAAGAATG GACACCGGAG GAACTGGACC AAACAGCTGA GGCAGTTGGA TATGGTGCGG TAAAGTATGC TGACCTGAAG AACAACAGAT TAACAAATTA TACTTTCAGC TTTGATCAAA TGCTTAATGA CAAGGGAAAT ACAGCCGTTT ACCTTCTTTA CGCTCATGCT CGGATCTGTT CAATCATCAG AAAGTCTGGC AAAGACATAG ATGAGCTGAG AAAGACAGGA AAACTAGCAT TGGATCATGC AGATGAACGA GCACTGGGGC TTCACTTGCT TCGATTTGCT GAGACGGTTG AGGAAGCTTG CACCAACTTG TTACCGAGCG TGCTGTGCGA GTACCTCTAC AATTTATCTG AACACTACAC CAGATTCTAC TCCAATTGTC AGGTCAATGG TTCACCAGAG GAGACAAGCC GTCTCCTACT TTGTGAAGCA ACGGCCATAG TTATGCGGAA ATGCTTCCAC CTTCTTGGAA TCACTCCTGT TTACAAGATT TGA 
Length1773
Protein Sequence
Protein Residue
Map Locationscaffold_7: 6233283.. 6237072
Download Sequence
A.thaliana
AGI-codeAT4G26300.1
DescriptionArginyl-tRNA synthetase, class Ic
TAIR curator summary
Alias[emb1027][embryo defective 1027]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg495780 CwfJ-like family protein / zinc finger (CCCH-type) family protein
8.94427 Ahg333729 Plant protein of unknown function (DUF946)
18.2757 Ahg493599 Peptidase M50 family protein
23.9583 Ahg335745 FKBP-like peptidyl-prolyl cis-trans isomerase family protein
24.0832 Ahg492636 Uncharacterised protein family (UPF0041)
24.3721 Ahg926900 flavodoxin family protein / radical SAM domain-containing protein
27.7128 Ahg351112 RNA polymerase II transcription mediators
30.282 Ahg938850 DNAse I-like superfamily protein
31.749 Ahg482029 ATP synthase protein I -related
43.0581 Ahg483634 Translation elongation factor EFG/EF2 protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression