Detail



ID : Ahg333729

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|333729|fgenesh1_pg.C_scaffold_1000294
Sequence
ATGGGAGACA GTGAGGCCAT GGTTTCCGAG GGATACGCTT CTGCTCCATA TGGAGATTAT AATGCTTCTG CTGCTACTGT GGAATCGACA GGGCAAGAGA CTGCACCAAT TGTTGATTCA TCACACTCGG TCAACAATGA TTCTGTGGTC AATGGGACTG CGCCAGTTGA GAACGGAAAT GCAACAGATA ACGTGGCTGT AACTGCTCCA GCAGCGGAGC ATGGAGACAA TCCTGGCTCT ACTCTCTCAC CGGAAGAGGA GCGCTTGTGG AATATTGTAA GGGCTAATTC TTCAGAGTTC AATGCTTGGA CTGCCTTGAT TGATGAGACG GAGAGGATAG CGCAGGACAA TATAGCAAAA ATCCGGAAGG TCTATGATGC TTTCTTAGCA GAATTTCCTT TGTGTTATGG CTATTGGAAA AAGTTTGCGG ATCATGAGGC TCGGGTGGGG GCAATGGACA AAGTCGTAGA GGTTTATGAA AGAGCAGTGC AGGGAGTTAC ATATTCAGTG GATATCTGGC TGCATTATTG CACTTTTGCC ATCAATACAT ATGGAGATCC AGACACAATC AGAAGGCTTT TTGAACGAGC TTTGGTTTAC GTTGGAACTG ATTTTCTTTC CTCTCCATTG TGGGACAAAT ACATTGAGTA TGAGTACATG CAGCAGGACT GGAGCCGAGT TGCCATGATT TACACCAGAA TATTGGAGAA TCCAATTCAA AATCTCGATA GATATTTCAG CAGTTTTAAG GAGCTAGCTG AAACCCGGCC TCTGTCGGAA CTAAGGAGTG CTGAGGAATC CGCAGCTGCT GTTGTTGCTG GTGATGCTTC TGAAAGTGCA CCATCTGAGT CTGGTGGAAA GGCAGATGAA GGACGATCTC AAGTTGATGG TTCCACCGAA CAATCCCCTA AATTGGAAAG TGCTAGTTCA ACTGATCCTG AGGAGTTGAA GAAATATGTT GGCATCAGGG AAGCCATGTA CATAAAATCC AAAGAGTTTG AATCTAAAAT CATTGGTTAT GAAATGGCTA TAAGGAGGCC CTATTTCCAT GTGCGTCCTC TGAATGTTGC AGAGCTAGAG AATTGGCACA ACTATCTAGA TTTCATCGAG AGGGATGGAG ACTTCAATAA GGTGGTCAAG TTGTATGAAA GATGTGTGGT TGCCTGTGCA AATTACCCAG GATACTGGAT TCGTTATGTG TCAAAAATGC GAGCAAGTGG AAGTACGGAC CTTGCAGAAA ATGCCCTTGC TCGAGCAACT CAAGTCTTTG TGAAGAAACA ACCAGAGATT CACCTTTTTG CTGCTCGATT AAAAGAGAAG AATGGAGATA TAGCTGGTGC TAGAGCTGCA TACCAATTAG TGCACTCTGA AATTTCTCCC GGACTTCTTG AAGCAGTAAT CAAACATGCA AACATGGAAC ACCGACTAGG TAATCTGGAT GATGCTTTCT CTTTGTATGA GCAAGTGATT GCTGTTGAAA AGGGGAAAGA GCATTCCACA ATACTGCCGC TGCTGTATGC TCAATATTCA AGGTTTTCAT ACTTGGTTTC CAGGGATACT GAGAAAGCTA GGAGGATTAT AGTCGAAGCA CTTGACCATG TACAACCGTC AAAACCACTC GTGGAATCAC TGATTCATTT TGAGACGATT CAGCCACCAC CAAGACAGAT TGATTACCTT GAGCCACTTG TAGAGAAAGT TATAAAGCCA GATGCAGATG CCCAGAACAT TGCAAGTGCC TCTGAGAGGG AAGAGCTATC CTTAATATAT ATAGAGTTCC TGGGTATTTT TGGTGATGTG GAGGCCATTC ATAAAGCGGA AGAGCAACAT GTTACACTGT TTTTACCTCA TCGGAGCACG TCAGATCTGA AAAAGCGTAG CGCAGATGAT TTTCTCTCAT CAGATAGGAC GAAAATGGCA AAAACTTACA ACGGCACTCC ACCTGCTCAG CCAGTATCCA ATGCATATCC AAATACTCAG GCTCAATGGT CTGGTGGTTA TGCTGCGCAA CCTCAGACTT GGCCACCAAC ACAAGCTGCT CCTGCTCAAC CGCAGCAATG GAACCCTGCC TACGGTCAAC AGGCTGCTTA TGGTGCATAT GGGGGATATC CTGCTGGCTA TACTGCTCCA CAGGCACCAA CACCTGTGCC ACAGGCCGCT GCTTATGGCG CCTATCCTGC TCAGACATAC CCAACACAGA GTTATGCACC TCCAGTTGCA GCTGCAGCAC CAGCGGCTGC GCCGGGTTTC GCAAGATCAG AGAAGAATAT GTTAGGTTAC AAATGTCTCC ACTGGAACAA TCTTATAGAT TTACCGCCAT TAAAGGACCC TGAAACCTTC TCTCTTCCTG CTTCCATTCC CCATTGGCCT CCAGGTCAAG GCTTTGGCTC TGGAACAATC AATCTCGGCA AATTACAAGT CATCAAAATC ACGGATTTTG AATTTATATG GCGATACAGA TCCACAGAGA AGAACAAGAG CATTTCATTC TACAAACCAA AGGGATTGTT TCCTAAAGAC TTCCATTGCT TAGGTCATTA CTGTCAATCT GATTCTCATC CTTTGAGAGG TTATCTTCTT GCGGCAAGAG ATTTAGTAGA TTCATTAGAA CAGGAAGAGA AACCTGCATT AGTGGAACCT GTTGATTTTA CTCTTGTCTG GAGCTCAAAT GATTCAGTAG AAGATGAATG TAGTAGTAAG AGCGAACGCG GTTACTTCTG GTTACCGCAG CCTCCTGAAG GGTATAGATC GATCGGTTTT GTGGTTACAA AGAGTTCTGT GAAACCTGAG TTGAATGAAG TTAGATGTGT TAGAGCTGAT CTTACTGATA AATGTGAAAC CCACAATGTC ATTGTCACTG CTGTTTCGGA ATCTTTAGGT GTTCCTTTGT TTATATGGAG AACTCGGCCT TCAGACCGCG GCATGTGGGG CAGAGGTGTC TCTGCAGGTA CTTTCTTCTG CAGAACTCGG CTTGTTCCTG CTAGAGAAGA TATTGGTATC GGTATTGCTT GTCTAAAGAA TCTAGATACG AATGTACACG CGATGCCAAA TGTTGATCAG ATTCAAGCTT TGATTCAACA CTATGGTCCT ACACTAGTCT TCCATCCTGG TGAAACTTAC TTACCTTCTT CTGTTTCGTG GTTCTTCAAG AATGGTGCAG CTCTCTGCGA GAAGGGAAAT CCGATCGATG AACTTATCAA TGAAAATGGC TCGAATTTGC CTCAAGGAGG AAGCAATGAC AAGCAGTTTT GGATTGATTT GCCGTGTGAT GATCAACAAA GAGATTTCGT CAAGCGAGGA AACCTTGAAA GTTCGAAACT TTACATTCAC ATTAAGCCTG CTCTTGGAGG AACGTTCACG GATCTTGTCT ACTGGATCTT CTGTCCTTTT AATGGACCAG CGACCTTAAA ACTAGGACTT GTCGATGTCT CATTGATCAG CATCGGCCAA CACGTCTGTG ATTGGGAACA TTTCACTCTC CGAATCAGCA ATTTCTCAGG TGAGCTTTAC TCAATCTACT TCTCACAACA CAGTGGCGGC GAGTGGATCG AAGCTTATGA CCTTGAATTC ATTCCCGGAA GCAACAAAGC CGTTGTTTAC TCGTCGAAAC ATGGTCACGC GAGCTTTCCT AAGGCTGGGA CTTACTTACA GGGATCGACA ATGCTTGGGA TTGGGATAAG AAACGACACT GCACGTAGTG AAGTCTTCGT AGATTCGAGC TCACGGTACG AGATCATTGC AGCAGAGTAT CTGGGCGGCA ACGGTGTGGT GGCAGAACCG CCATGGCTGC AGTATATGAG AGAATGGGGA CCAAAGGTTG TCTACGATTC AAGAGAGGAG ATAGAAAGAT TGGTGAATCG ATTTCCGAGG ACGGTTAGGG TTTCGCTTGC TACAGTGCTG AGAAAACTTC CGGTGGAATT ATCCGGCGAG GAAGGTCCAA CGGGACCGAA GGAGAAGAAC AATTGGTATG GCGATGAAAG ATGGTGA 
Length3987
Protein Sequence
Protein Residue
Map Locationscaffold_1: 1202634.. 1210189
Download Sequence
A.thaliana
AGI-codeAT1G04090.1
DescriptionPlant protein of unknown function (DUF946)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6 Ahg480601 ubiquitin family protein
7.74597 Ahg474946 Reticulan like protein B3
8.94427 Ahg329048 Arginyl-tRNA synthetase, class Ic
9.79796 Ahg915255
14.8324 Ahg357610
16.5227 Ahg936755 UDP-glucose 6-dehydrogenase family protein
18.3303 Ahg486867
20.8327 Ahg921968 Transducin/WD40 repeat-like superfamily protein
22.2486 Ahg486447 LETM1-like protein
24.7386 Ahg491436 La protein 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression