Detail


ID : Ahg329212

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|329212|fgenesh1_pm.C_scaffold_7001439
Sequence
ATGGAAGATT CAGAGAGAAG AAAACAAATG TTAAAAGCAA TGCGAATGGA AGCTGCTGCA CAGAATGATA ATGATGATTC TACTACAGGT CCTGAAACAT CTATGAACAC AGGTCACCTC TCCAATCCCT TGGCAGAGAC ATCCACTCAC CACCAGGATT CATTTGAAAC ATCAAGGTTT GATTATTATA CCGACCCCAT GTCTGCTTAT TCTAGTTTCA AGAAAAACAA GACCCCTAAG CAACAATACA TCTCATCTCC TTGTCATCAA GCAAGCTCTC CTGTACCGCC ACAGTTTCCG CCATCAGTTC CTCCAGGGTC GTTAGGTAGT GAGTATCAGG CACATACCAA TCAGGGCGGC TTTCAAGCAG CTCATTATGA ACCAAGAGGG ATGTCACATC TTGCACCCCC ATACAGAGGT TCACCCGCCA GTTGGAATAA CAATTTTAGG CCTCCACCAG TTAACCATCC AGGTCCACCT CAATGGGTAC CTCGCCCTTT TCCATTTTCT CAAGAAACTC CGGACATGGG GAATAATAGA TTTGGTGGTC AAGGCAGCTA CAACAATACC GCTCCACATT TTTCCAATTA TGGACGACAA AATGCAAACT GGGTTGGAAA CACATATCCT AACTCAGGAA GAGGCGGAAG TCGAGGACGC GGTATGAACA CAAGCTTTGG TAGAGATGGA GGAAGAAGAC CCATGGAACT AGGGGCAGAA CGATATTACT CCAATTCCAT GGCTGATGAT CCATGGAAGT ATCTTAAGCC AGTCATATGG AAGAGTTGCT CAGATGCTTC GAGCAGCAAC TCAACAGGTC AAGCCTGGCT TCCCAATTCT ATAGCACCAA AAAAATCTGT GACCTCAGAA GCTACCCACA AACCTAGCAA TAATCAGCAG AGCCTTGCTG AGTACCTCGC TGCATCTCTA GATGAGGCTA CATGCGATGA GTCAAGCAGT TGA
Length963
Protein Sequence
Protein Residue
Map Locationscaffold_7: 7036770.. 7038263
Download Sequence
A.thaliana
AGI-codeAT4G24500.1
Descriptionhydroxyproline-rich glycoprotein family protein
TAIR curator summary
Alias[SIC][SICKLE]
Gene coexpression
MR
MR Locus Description
21.9089 Ahg928658 isocitrate dehydrogenase VI
29.1548 Ahg941835 nuclear-encoded CLP protease P7
32.4962 Ahg492264 fibrillarin 2
33.2866 Ahg489809 calcium-dependent protein kinase 4
34.4674 Ahg489803 cytosolic invertase 2
35.9444 Ahg477117 Pentatricopeptide repeat (PPR) superfamily protein
39.2428 Ahg945746 Potassium transporter family protein
49.7795 Ahg497180 Protein of unknown function (DUF2361)
51.3517 Ahg493939 embryo defective 3012
54.4794 Ahg483494 Transducin/WD40 repeat-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression