Detail



ID : Ahg332601

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|332601|fgenesh1_pm.C_scaffold_8001944
Sequence
ATGATGCCGG AGAAGACGAT TATTACGTCG GAGAGTTCAA ATTCGTCTCC GTTAAACCCT TCATCTTCGC GGATTATCTG CCATGTGTGT AATAAGCAGT TCTCGCAGTA CACTTGTCCT CGCTGCAACT TCCGGTACTG CTCTCTTCCT TGTTACAAAT CTCACAGTGT CCAATGTACT GAATCTTTCA TGAGAGAGAA TGTAAATGAT GAGTTGAAGC AAGTTCGATC TGATGATCAA ACGAAAACGA AGATGCTCGA AATTTTGAAA AGGTTTCACG AAGAAGAGGA AGAAGATGAT GGAGGAATTG ATAGCATCAC GGATGATGAA GGTTCGATCT TACCGGAGGA GATTATTGAG AAGATAATGA ACGGAGATGA AGTAAGTCTT GATGATTTGA GCTTAGAAGA GAGAAAAGGG TTCCAAAGAG CCTTAGCTTC TGGAGAATTA AGCAAAATGA TTCAACCATG GGATCCTTGG TGGTTACGTG CTTCAGCTCG AACGATCAAT CTTGGACTCG GAGGTACACA ACTCGTTCAA TGTGTTGAAG AAGAAGAAGA AGAAGCCATT GTTGTGAGTG AAGTTCCACG AGGGCCTGAT ACACCTCTGA TCTCACTAAG CAAGCTTAGC TCAACGAATC CATCTCCTCT CTTACCAATC CATTTGATTG ATATCGTATA TAGCTATTGT TTTACTCTCC GTATCTATAA TGGAGAGTGG CAATCTAATT CGTTAGGTGC AGCAACAATG GTGTTAACTG TTTCATCAGT TTTGGGTCAG AATGCACAAC TTGAGACCAT TAAGGAAGTG TTGGCGTTTT GCTTGGAACA GACATGCTCT TCTGCTTATA AGAACCTTGG CGGCGGTTTG AAGTTCGGAT TGAATCTGGT CGATGATGTG ATTTGTTTGC TTTCTCTTGG CTCTGGAGCT ATGGTATGTC TGCTCTGTGA TCTCCAAAGG TTGATTCTTG GTGCAATAAA GGAAGTAAAA TCATCATCAG GGCGTGATCT GAAGAAGAAA CTTAAGCTTG CAGAAAGGAA AGTGTTCTTC ATGATGTGTT GGGTCAATGA GCAGAGTTCT GAAGTGTGGC AAGCTCTGGA ATCATCAGTA AGGGCAGAGA AGAACTCGGT GGTTGAGCTC AACGATTGCA AAGGGTTTCC GAATATGAAG AAAATAGATC AATTCCAAAA AGGCGGTGGC GTGGTGATTG AGGAGATAGA ATGA 
Length1224
Protein Sequence
Protein Residue
Map Locationscaffold_8: 19891021.. 19892238
Download Sequence
A.thaliana
AGI-codeAT5G63830.1
DescriptionHIT-type Zinc finger family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
14.5258 Ahg918994 Transcription factor TFIIE, alpha subunit
22.9565 Ahg330218 AMP-dependent synthetase and ligase family protein
34.322 Ahg496602 phosphatidylinositol 4-OH kinase beta1
34.5543 Ahg475439 Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain
37.1483 Ahg356991 Protein of unknown function DUF2359, transmembrane
51.3517 Ahg484426 eukaryotic release factor 1-3
55.6956 Ahg488520
56.6392 Ahg485684 ubiquitin-protein ligase 7
59.8331 Ahg488346 SIN3-like 2
61.3677 Ahg946393 phytochrome E
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression