Detail



ID : Ahg475439

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|475439|fgenesh2_kg.2__569__AT1G58250.1
Sequence
TCTCTTTCTC TCTCTAGCGA TCACACTTCC AAAACCTCGC GGATCGGATC TTTCTTCCAT GGCATCAGCT CTATAGTCTC ACAATTTTGA CTGTTTTGAA ACAATTAGGG TTTTATCTCT TGGACTTGGG AAGTGTAATG GTGTTTTGCT CAGAAATCGT TTGTTTTAGT GCCGACGGTG GTTGAGTAAT CAGTTAGTGA AATCCGGCGG AGTTAGTTAT CTCTCTGCGG CGGTGGATAT GGCTGCTTCA CCTGCGAAGT TCTTCTTCGG GTTTCTAATT GTTTCCATCG TTTTGTGGAT GATCTTCATA CTTTGTTCCA GGTTGTTTGC TTGGATGCTT AGTAGAGTGC TTGGAGCATC GGTTGTGTTT CGTGTTGGCG GTTGGAAATG CCTCAAGGAT GTTGTGGTGA AGTTTAAAAA GGGTGCTGTT GAGTCCGTGT CCGCTAGTGA AATTAAACTA AGCTTACGCC AGTCCTTGGT GAAACTTGGG GTTGGTTTTC TTTCTAGAGA TCCGAAAATG CAAGTCTTGA TATCTGATCT TGAAGTTGTG ATGAGGTCAT CAACCTCAAC AACAAATTTA CAGAAGGCTA AAAGTCAGAA ATCTCGTACT TCAGGCAGGG GAAAGTGGAT GGTGGTGGCT AATGTTGCAA GGTTTCTTTC AGTCTCTGTC GCAGATATGG TTTTGAAGAC CCCAAAGGTG ATTGTGGAAG TCAAGGAACT GAAGTTGGAT ATAAATAAAG ATGGTGGGAC AAAGCCAAAT CTTTATGTTA AGTTGAATGT TCTACCAATC CTGGTTCACT TATGTGAATC ACGCATAATT TCTGATCAGT CATCTAGCGG AAGCTTTGAA AGTTGTCCTG CTTCACAAGT GTCCTCTGCC TCTCCAGACA GATCTGCTGC TGCTTTATTT TGTGACGAAC TTTCTCTTTC TTCCGAGTTT GGACATGACA GGGCAGTAGG CATTGTTGTA CGAAACGTGG AAGTTACATC TGGAGATGTA ATTCTGAATT TTGACGAGGA TTCATTTCCC AAGAGCAAAC AATCATCAGC TTCAGCTCGT TCAGACGAAG TTAGATTGTC AGCTACTGCT GCCTCATCTG CGAAGAAACC CCATAAAGAG AATCAGCTGC TGGCAGCACT TGCAAAGTAT TCTCCGTCTT TTCCTGAAAA GGTTTCCTTC AGTTTACCCA AACTGGATAT CAGATGTGTA AATCGAGAAC ATGATCTTCT TGCTGAGAAC AACATCACAG GAATTCAACT GAGGAGTGTT AAATCAAAAT CTTTTGAAGA CACAGGGGAG AGTACACGTC TTGATGTTCA GATGGAACTC AGTGAGATTC ATGTTTTCAG AGAAGCTGAG TCCTCTATTT TAGAGATCAT GAAAGTTGAT GTGGTCTCTT TTATCTACAT CCCAGTTCAG CCGGTTCTGC CTATCAGAGC TGAAGTTGAT ATAAAGCTAG GAGGTACCAG ATGTAAGCTA TTCATTTCTA GGCTACAGCC ATGGTTGCGC CTTCATTTCC TAAAAAAGAA AAAACTGGTG CTTCAAGAAA AAACTCACAC TGTCGAGAAA ACAAAAGCTG CTGATATGAA GGCCATCATG TGGACAGGCA CAGTTTCAGC CCCGGAGATG ACAGTGATGC TATATGGTAC TGAAGATTTG CCGCTGTATC ATTTTTGTTC CCAGTCATCA CATGTGTTTG CAAACAACGT TTCGAGTCTG GGTACAGCAG TTCATGTTGA ACTTGGTGAA TTGAATCTGC ATTTGGCAGA TGAGTACCAA GAATGCTTTA AAGAACACCT TTTCGGAATA GAGCCAAACT CTGGTTCGTT GATGCATATA GCAAAGGTTA GCTTGGATTG GGGAAGAAGA GATAGGACAT CATCTGACGA GGTTGGTTTC AGAAGTAAAT TGGTACTCTC AGTAGATGTA ACTGGAATGG GTATCTATTT TTCTTTCAAG CGTGTTGAAT CTCTCATAAC AAATGCTATG TCCTTCAAAG CTCTCTTTAA GACATTATCT GTTACTGGCA AAACGAAGAA TAAGACTGGT GGTGTGCAAC AATCCAAAGC ATCTGGGAAA GGAACTAGGC TTGTGAACCT GAATCTTGAA CGTTGCTGTG TAACTCTCTG TGATGATACA GGATTGGATA ATACAATTAT TGACGATCCT AAATCTGTCA ATTATGGGTC ACAAGGTGGT CGGGTTTCAT TTAGCTCACT GGCTGACGGC ACACCACGCA CTGCGACAAT TCTGTCCACT GCTCCTGAAT CTTGTAAAAG ACTGAAGTAC TCGGTCTCTC TTGAAATATC ACAGTTTAGC TTTTGTCTCA ACAAGGATAA ACACTCAACC CAAATGGAAC TTGAAAGGGC AAAATCCATC TACCAGGAGT ATCTGGAGGA GCATAAGCCT TGTTCGAATG TCATATTGTT TGATATGCAC AACGCGAAGC TTGTACGTCG ATCAGGTGGT CTTAATGAAA TTGATGTCTG TTCTCTCTTC AGTGCTACTC ATATTTCGCT GGGTTGGGAA CCTGACGTCC ATCTATCTTT TTATGAACTG TTTTTGCGGT TGAGATCCCT GGTGTATGCA CAAAGGCATA AAGAACCTGA AGGGGGGTGC AATAAAGGCA TCTCTAGTGT GAAAGATGAT GGCCTGAGTG AAAAAATAAA TCAGTCCAAT TCTATTGACG AGCAGAAGAA AAAGGAATCT ATGTTTGCTA TTGATGTGGA AACGTTGACT ATATCAGCTG AGGTAGGAGA TGGGGTGGAG GTTAAGTTGG AGGCACAGTC AATTTTTTCT GAGAATGCCT GTATAGGAGT GCTTCTTGAG GGGCTTATGC TTGCTTTTAA TGGATCTCGA GTATTTAAAA CTACAAGAAT GCAAATATCA AGAATCCCTA CTGCTACTTT GAATTTGCCT GATGCAGTCC CTGTACTGAC AGGTGGTCCT TGGGACTGGG TAGTACAAGG GCTTGACGTG CATATCTGTA TGCCATACAA ACTACAGTTG CGTGCCATAG ATGATTCAAT AGAAGAGATG TTGCGAGGCT TGAGACTTAT ATCTGTAGCA AAGGGAAGAC ATATTTTATC AGGAAAGAGA GAAGGCTCAA AGCCTAAGAA ATCTAGTCCA AAATTTGGCC GCATAAGATT TTGCATACGC AGATTAACCG CAGATATTGA GGAAGAACCA ATTCAGGGTT GGCTTGATGA ACACTATCAG CTGGTGAAGA AAGAAGCCTG CGAGTTGGCT GTCAGATTGA AATTCCTTGA AGATTTTATT CACAAAGCTG GTCAGTCTCC TAAAAGTGCA GAAACAAGTG CTGTATTAGA TGAAAGAAAG ATGTTTTTTG ATGGGGTTGA AATTGATGTT GAGGACCCTG TAGCCATTAA CAAAGTGAAG GAAGAGATTC ATAAACGGTC GTTTCAATCA TATTATCAGG CGTGTCAGGG TTTAGCTCCC TCAGAGGGTT CAGGTGCCTG TAGGGAGGGA TTCCAAGCAG GTTTTAAGCC CAGTGCTGCT AGAACTTCTC TTCTTTCTGT TTGTGCCACA GATTTTGATT TAAGCTTGAC GGCAGTTCAT GGTGGTGATG CTGGTTTGAT AGAAGTCTTG AAGAAGCTTG ATCCTATTTG TGAAGAAAAC GACATACCCT TTTCTCGGTT ATATGGAAGC AATGTTTACT TGAATACTGG AAGCTTGGTA GTTCAGTTAA GAAATTATAA ACTTCCTCTC CTCTCTGGCA CTTCTGGCAA ATGTGAAGGT CGTATTGTGC TGGCTCAGCA GGCAACATGT TTCCAGCCAC AAATTTCCCA AGATGTCTTT GTCGGCAGAT GGAGAAAAGT GCAAATGTTC CGGTCAGCCA GTGGCACAAC TCCGCCGTTG AAGACCTACT CAGATTTGCG GATACACTTT GAAAAAGGAG AAGTTTCATT TGGGGTTGGA TATGAACCAG CTTTTGCAGA TATTAGCTAT GCCTTTACAG TGGCTCTTCG TAGAGCTAAT CTAAGTCATA GGAATCCAGA TATGGTACAA GTCATTAAAA AAGAACGAAG CTTACCTTGG TGGGATGATA TGAGAAACTA CGTTCATGGC AATATCACTT TATCTTTTTC TGAATCAAAG TGGTCTGTTC TTGCTACAAC TGATCCATAT GAGAGTCTTG ACAAACTTCA AATAGTGTCT GGTCCTATTG AACTTCAGCA GTCAGATGGT CGTGTGTTTG TCAATGCTAA AGACTTTAAG ATAAAATTGA GCAGTCTAGA GAGTTTGATT AGTCGACACT CTTTAAAAGT TCCAGTCCGC GCTTCTGGAG CTGCATTTAT TGAAGCCCCA GATTTTAATC TCGAAGTTAC AATGGACTGG GATTGCGAAT CTGGAAATTC TTTAAATCAT TACCTATATG CATTTCCAGC TGAAGGAAAG CCTCGTGAGA AGGTCTTTGA TCCATTCAGA TCAACATCAC TCTCGCTTCG GTGGAATTTC TCCCTTAGAC CCAAAAAATT CCACCAGTCT TCCTCAGGTA CTGAGCCTCC AACAGACGTT GGAACCGTCT ACAGTTCGCA AGACAAGCCT GACAGCATTC CTCTTGCATC CCCAACTATG AATCTTGGAG CTCATGATTT GGCATGGATA CTTAAGTTTT GGGGTCTGAA TTACTATCCT CCTCATAAGT TGCGTTCTTT CTCGAGATGG CCTAGGTTTG GCGTCCCCAG AGCTGCAAGA TCAGGAAACT TATCCCTAGA TAAGGTGATG ACAGAATTTA TGCTCCGTGT AGATGCCACA CCTTCCCTGA TAAAATACAT GCCTTGGGAC TCTGATGACC CTGCCAGAGG ATTGACCTTT AACATGGCAA AGCTAAAATA CGAATTATGC TATAGTCGCG GGAAGCAAAA GTATACATTT GAATGCAAGC GGGATGCGCT TGACCTTGTA TATCAGGGTC TTGACCTTCA TGTGCCGAAA GCTTTTATCA ACAAAGACGA GCATCCTTGC ATTCCAGGAA GTGTTCAGTT TTTGAGGAAA AGTACTCAGG ATGCTTTGAT AGACCGAGTA CCATCTGGGA AGGACCATAA AAGGGATGAA AAGCATCGCG ATGATGGGTT TCTTTTGTCT TCTGACTATT TTACCATCAG AAGGCAAGCC CCAAAAGCAG ATCCTGAGAG ACTATTGGCA TGGCAAGAGG CTGGAAGAAG AAATCTTGAG ATGACATATG TACGGTCTGA GTTTGAGAAT GGAAGTGAGA GTGATGAACA CATACGATCA GATCCTAGTG ATGATGACGG GTACAATGTT GTTATTGCTG ACAACTGTCA GCGGGTCTTT GTTTACGGTC TCAAACTCCT GTGGACGATA GAGAACAGGG ATGCTGTTTG GTCTTTTGTT GGTGGAATAT CAAAAGCGTT TGAACCTCCT AAACCTTCTC CTTCTCGTCA GTATACACAG AGGAAGATTC TTGAAGAAAA CCAAAAGGAA TCTTGTCCAG AAACGCATCA AGGGGAAATG TCGAGATCTT CTGCAAGCCC TGGAAGAAAC CTCCCTTCAT CACCGTCACA CTCAATAAAA ATTGTGAAAT CAGATGACAT TGGTACAGTT GAGACCATTG AATCTGAGGA AGAAGGGACT CGTCACTTCA TGGTGAATGT CATTGAGCCA CAGTTTAATC TTCACTCAGA AGAAGCTAAT GGTCGCTTTC TGCTTGCTGC TGTTAGCGGT CGTGTCCTAG CACGATCGTT TCATTCCATT ATGCGTGTTG GTGTGGAAGT GATTGAGCAG GCTCTTGGCA CTGGAAGTGT CAAAATTCCA GAATGTAGTC CTGAAATGAC ATGGACACGG ATGGAAGTTT CTGTAATGTT AGAGCATGTA CAAGCCCATG TTGCTCCCAC TGATGTTGAC CCAGGTGCTG GATTGCAGTG GCTCCCAAAA ATTCGCAGAA ACTCGCCAAA AGTGAAGCGT ACTGGGGCTC TACTTGAAAG AGTTTTCATG CCTTGTGACA TGTATTTCCG GTATACTAGA CACAAAGGTG GAACCCCTGA TCTAAAGGTG AAACCACTAA AAGAGCTTAC TTTCAATTCG CACAATATAA TAGCTACAAT GACATCTCGG CAATTCCAAG TTATGCTGGA TGTGTTGACC AACCTTCTCT TTGCAAGGCT TCCAAAGCCT CGGAAAAGTA GTCTCCAATG TCCCACGGAA GATGAAGATG TTGAAGAGGA GGCTGATGAG GTAGTTCCGT ATGGAGTTGA AGAAGTGGAA CTTGCAAAAA TCAACCTTGA AGAGAAAGAG CGGGGGCGAA AGTTGCTTCT TGATGATATT AGGAAATTGT CTCCTTGTTC CGACAATATG GACGACACAC ATATCGAAAG GGAAGGTGAA TTGTGGATGA TTAGTACCAG AAGATCCATA CTGGTACAAG GATTAAAGAA AGAGCTCACA TATGCACAAA AGTCTAGAAA GGCGGCTTCT GCATCTTTAA GAATGGCGTT GCAGAAGGCT GCACAGCTGC GAATAATGGA GAAGGAGAAG AACAAAAGCC CATCATATGC TATGTGTATT TCGTTACAAA TTAATAAGGT TGTTTGGAGC ATGCTTGTAG ATGGTAAATC CTTTGCTGAG GCAGAGATAA ATGACATGAT TTATGACTTT GATCGGGACT ACAAAGACAT TGGTGTTGCT CGATTCACCA CCAAGTACTT TGTTGTTAGG AACTGTCTGC CAAATGCAAA GTCAGATATG CTTTTATCAG CATGGAATCC TCCACCTGAA TGGGGAAAGA AAGTCATGCT ACGTGTGGAT GCAAAGCAAG GAGCGCCAAA AGATGGACAT TATCCCCTAG AGCTTTTTCA TGTGGAGATT TATCCACTAA GAATTCATTT AACAGAGACA ATGTACAGAA TGATGTGGGA GTATTTCTTC CCAGAAGAAG AGCAGGATTC ACAAAGTCGA CAGGAAGTTT GGAAAATTTC GACAACAGCC GGTTCAAAAC GTGTAAAGAA AGGGTTAGTA GGTCATGAAT CTTCTGGACA CGCCATTAAA GATGTTGAAG CAGCTCGAAA GAGTTCTTCA GCTCTCTCTG CTTCTGCCGC AGTGCAGTCA CAAAGCAATG CTGACTCTGT TCAAAAATCA AATATTCTAT GCCTCAGGAC TAGCACTGGT GGGTCAGCTC CGGAGTTGAG AAGAACATCT TCTTTCGATA GGGAAGAAAA TGTGGCAGAA CCTGTAGCTA ATGAACTTGT TCTACAAGCT CACTCTTGCA CCGTGTCATC TTCTGTTGAA CAACAGGAGG AATCCTCTAA ACAGAAGGTC AAAGAGATAA AACCTGTCAA GTCTGGCCGC TCTTCTCATG AAGAAAAGAA GGCTGGAAAA TCACACGAGG AGAAGAAGTC TAGGCCTAGA AAGATGATGG AGTTTCACAA CATTAAAATT AGTCAGGTGG AGCTTCTAGT TACTTACGAG GGCTCAAGAT TTGTTGTAAA CGACCTCAAA TTGTTGATGG ATACATTTCA TCGTGTTGAG TTTACCGGGA CTTGGAGAAG GCTTTTTTCC CGTGTTAAGA AGCACATAAT TTGGGGAGTA TTGAAGTCAG TTACTGGAAT GCAGGGGAAG AAATTCAAAG ACAAGTCAAA TAACAATCGC GAGTCTACTG ACAATGACCT GAATCTAAGC GACAATGATC AAACTGGGAA ACCTGATCAA CAAGTCACAT GGTTTAAGCG TCAAAGTGAT GGAGCAGGTG ATGGATTTGT TACTTCTATT CGAGGACTCT TCAATACCCA AAGACGCAAG GCCAAAGCAT TTGTCTTGAG AACTATGAGA GGTGAAGCGG AGAATGGCTT CCACGGGGAC TGGAGTGACA GCGATGTAGA ATTCTCTCCT TTTGCTCGGC AATTAACTAT AACAAAAGCT AAGAGAATCA TCAGACGGCA CACTAAAAAA TTCCGTCCAA GATCTCAAAG AGGTTCAACA TCTCAGCAAA GAGAATCACT TCCATCATCT CCAAGAGAGA CGACTGCATT TGAAAGTGGT TATTCAAGTG GATCTTCACC ATACGAAGAT TTTCGTGAAT AAAAACTCAT TCTGACCAAA TTTTGTTATC ACCGGTGAAA TAGGAGAAAA AAAAAAGTAT ATTAGGAGAG AGAGAGAAAT AGATCAACAA TATTGTACAG ACGTTGGTAT ATTGGAGTAT AAA 
Length8183
Protein Sequence
Protein Residue
Map Locationscaffold_2: 4195287.. 4209663
Download Sequence
A.thaliana
AGI-codeAT1G58250.2
DescriptionGolgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain
TAIR curator summarySABRE, putative gene of unknown function, homologous to maize apt1 gene. Required for normal cell expansion in the root cortex. The sabre mutation results in abnormal cell expansion. Encodes a rare message; very low level of expression was detected in roots and shoots.
Alias[HPS4][SAB][hypersensitive to Pi starvation 4][SABRE]
Gene coexpression
MR
MR Locus Description
3.60555 Ahg470924 P-loop containing nucleoside triphosphate hydrolases superfamily protein
7.87401 Ahg916552
8.48528 Ahg480691 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain
8.94427 Ahg897087 HOPM interactor 7
13.7477 Ahg480306 chromatin remodeling 5
15.8745 Ahg931204 vaculolar sorting receptor 3
17.8326 Ahg328336 RING/U-box superfamily protein
18.1659 Ahg481550 ARM repeat superfamily protein
23.6643 Ahg478222 mRNA capping enzyme family protein
24.1454 Ahg496493 histone deacetylase 6
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression