| Annotation |
|---|
| Description | jgi|Araly1|336019|fgenesh1_pg.C_scaffold_1002584 |
| Sequence |
ATGGCCAAAT TCTTCATTCT CTTCCTTGCC TCTGCCCTAT GTTTCACCAC CCTCATTCAC TTCACCGCAG CTGATGCTGA CGACTTCGAC AAATTCCACA TCAAGGGCTC CGTCTACTGC GACACATGCC GTGTCCAATT CATCACCCGT CTTAGCAAGT TCCTCGAAGG GGCAAAGGTA AAGCTTGAGT GCAAGGGCCG TGAGAACCAG ACAGTGACAC TTACCAAAGA AGCTGTGACC GACAACGCCG GAAACTACCA GATGGAAGTA ATGGGTGACC ACGAAGAGGA AGTGTGCGAG ATCGTCCTTG TCCAATCACC TGACGCAGAG TGTGGAGAAG TGAACAACCA AGAGTTCCTA AGAAACGCAG CCAGGATCAG TCTCACGGCC AATGATGGCA TTGTCTCCAA CGAGACTCGA ACCATTAACC CACTTGGGTT CATGAGGAAG ACTCCTCTCG CTGAATATTC TAAAGACAAA TATACCCTTG AAAAAATTGT AAAACTACGA GAAGACCGTC CATTTATCTT TCCTTTCAAG CCAAAAATCT CACGAATCTT CTATTTCTTC TCTACCGTCG TCGAAAGCTT TACCAAAATC TCACGCCCCC GACGATTCTG CCGATTCATC GAGACGATTT CCCTGGCTTT AGAAGCCAAC AGCTCGGAGG CTATTTCGAT ACTGTACCAG GTTTTGGAAG ATCCTTCTTC ATCTCCAGAG GCTATACGGA TCAAGGAGCA AGCGATTACA AATCTCTGTG ATCGACTGAC TGAAGAGAAG AGAGGTGAGG ATCTCCGGAA ACTGTTAACC AAGTTGAGGC CTTTCTTTTC GTTAATCCCC AAGGCGAAAA CTGCAAAAAT CGTCAGAGGA ATCATTGATG CTGTGGCAAA GATACCTGGA ACAACTGATC TCCAGATCAC TCTCTGCAAA GAAATGGTGG AATGGACTCG CGCTGAGAAG CGTACTTTCC TCAGGCAGCG AGTAGAGGCT AGGCTTGCAG CTCTTTTGAT GGAGAACAAG GAGTATGTTG AAGCTTTGGC ACTGTTGAGT ACTTTGGTAA AAGAGGTTAG GAGATTAGAT GATAAGCTCC TTCTGGTTGA CATAGACTTG TTGGAGAGCA AACTTCACTT CTCATTGAGA AACTTACCCA AGGCAAAAGC TGCACTCACT GCAGCTAGGA CAGCTGCTAA CGCTATATAT GTCCCACCGG CTCAACAAGG CACCATAGAC CTGCAGAGTG GGATTCTTCA CGCTGAAGAG AAGGACTACA AAACCGGATA CAGTTACTTC TTTGAAGCCT TTGAGTCCTT CAATGCTCTC GGAGATCCAA GAGCGGTTTT CAGTTTGAAA TACATGTTAC TGTGCAAGAT CATGGTTAGC CAAGCTGATG ATGTTGCAGG AATAATCTCC TCAAAGGCTG GACTACAATA TGTTGGCCCT GACTTGGATG CCATGAAAGC AGTCGCTGAT GCTCACTCAA AGAGATCCTT GAAACTGTTT GAGAACGCAC TCCGTGACTA CAAAGCACAG CTTGAAGATG ACCCAATTGT CCACAGGCAT CTCTCGTCTC TCTATGACAC GCTTTTGGAG CAAAACCTGT GTCGTTTGAT CGAGCCCTTT TCAAGGGTTG AGATAGCGCA CATTGCTGAG CTGATTGGAT TACCGCTCGA CCATGTGGAG AAGAAGCTAT CTCAGATGAT ACTGGACAAG AAATTTGCAG GGACATTGGA TCAAGGAGCT GGATGCCTCA TCATCTTCGA AGACCCAAAG GCAGATGCTA TCTACTCAGC TACTCTCGAC ACCATTGCAA ACATGGGGAA GGTCGTCGAC AGCCTTTATG TCCGGTCTGC CAAAATCATG TCCTGA |
| Length | 1866 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 12144738.. 12148231 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G29150.1 |
| Description | non-ATPase subunit 9 |
| TAIR curator summary | specifically interacts with FUS6/COP11 via the C-terminal domain of FUS6/COP11 and associates with an ATPase subunit of the 19S proteasome regulatory complex, AtS6A. |
| Alias | [ATS9][RPN6][non-ATPase subunit 9][REGULATORY PARTICLE NON-ATPASE 6] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg482201 | LEUNIG_homolog |
| 3 |
Ahg470642 | Ribosomal protein S5/Elongation factor G/III/V family protein |
| 6.32456 |
Ahg951196 | Glycosyl hydrolases family 31 protein |
| 7.61577 |
Ahg495042 | exocyst complex component 84B |
| 7.93725 |
Ahg471459 | 20S proteasome beta subunit E1 |
| 8.48528 |
Ahg497403 | HR-like lesion-inducing protein-related |
| 10 |
Ahg943470 | cullin 1 |
| 10.198 |
Ahg485614 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
| 10.9545 |
Ahg493493 | Sec23/Sec24 protein transport family protein |
| 12 |
Ahg489005 | Glycosyl hydrolase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|