Detail



ID : Ahg917379

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|917379|Al_scaffold_0008_2130
Sequence
ATGCCAGGAA CTATACAAGT TTCAGTTCTG GGTCTTATTG ATGTTCACAC AGCTTCTTCA AACACTTCCA TTAAAGTTTC TATGGGGAAG CTAGAGTATC GAACTTCAAA TTCAGGAGAC TACATTTTTC CAGTTACGAG GCTCCGAGAA AATTTGATTG TTACTCTGTT AGATGTCAAT GGAAACCAGA TATTACACAA AGAGATAGAG ACAAGAATGA TAATAGAGAG TGGTTTCTTG GAAGAGAAAC TTTCATTCAG TGGCTATGGA AATGTACAAT TGAAAATGCA GTTTGTTCTC AGCGAAGAAG ATCGAAATCG CATACGTTTC CTGAGACAAT CGGCATTGCG AAAGAAGCAC GAGGAGCTTG TTAATGGCAG TTCTTTTACC AAATCTAAAA GCATTGCTTC AGATTTGTCT TCTTTAAGTT CAATGCAAAC CCGAGAAATC GTGGCTGTTG CTACTAATCC AAAGACAAAT CTTGGTCTGT CTCAAGAAAC CGAGCGTAAA AATAATGCAG ATAGAGATAC GGTTTCGTCG AATCTTATAA TGTGGAAGCC TGAAGTAAAA GATACAGTTG AGAAGACGAA AATTCAACTA TCTTCATCAG ATGTTTCTTC AAGCAAGAAG CTTCCGGAGG TTAAAAAAAC TGCAAGTGTA TTGTTAGTGA AGCAAGAAGA TAAGGGTTTG AGCAAACCAA GCAAGAAGCT TCATGAGGTT AAAACCCCGG AGAGAGTATT GTTAGTGAAG CAAGAAGATA AGGGTTTGAG CAAACCAATC AAGAAGCTTA CGGAGGCTAA AAACACCGAG TGTGTATCGT TAGTGAAGCA AGAAGATACG GGTTTGAGCA AACCGGAAAG AAATCCTAAA CGGAAGTCAA TGAGGCGGAG TATGTCAGAC TCAAATTTGA ACAATGTGCG GAAAATGATA AGCAACTTTG AGGTCAAAGT TACTCAGGAT ACCAAAATTC GGACAGCGAA GATTCAAACT GGTTCTTATA AAGATGCGGA GGAGAAAACT AAGGCGCAAC CACAAGCGGA AAGCACTGTG AATCTAGAGA AACTGGAAGA AAGTAAGATC ATAAGCTTTG AGAATATGGA GAAGTCAGTG TGTAGAGATA ACACAGATAG ATGTGATGAT TTAGTAATAT TTTCAGGAGA TGAAAGGTCA ATAGTTATAG AGGAGAAGAG ACTTGAACAT AACACTAGAA GAAGTGACTT TTTAAGTACG CAAAGACGAA GTTCGGTGGT GAAAGTAAGG GATGATGAGA AGAAACCAAA CAAATCTGTG TGTTTGAAAG ATTCTCAACT TGAGAATGCA CGAGGATCTC GTCTCTGGAT ATTTCCAGAT GAGGCAAAAG ATTTGTCTTG CGAAACAGAT TTAGGAACAA GACGTTTGGA TTTAGCAGAA GCATATATGT TACAGAAGAG GATAGAAGAG TCTACTAGGG AAAACATCGG TGAGAGGGGA TTCCGCTGCA TAAGCATCGC AAAAATAGAT AGTAACAACA AGTGGAAGAA CATAGAGCGA TCGAAGAAAC AAAAGTCGGA GAATTCTGCA GAGTCAGAAA GTTCAGGACG ACCTGTTGGA CAAGTGATGC GTGCGTTGAT CGTGGCGGGT TTTGCAGGGT TAGTGTTTTT GACACGACAA AGAACTTAA 
Length1659
Protein Sequence
Protein Residue
Map Locationscaffold_8: 16678497.. 16681049
Download Sequence
A.thaliana
AGI-codeAT5G56850.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
14.8997 Ahg934121 Tetratricopeptide repeat (TPR)-like superfamily protein
15.4596 Ahg922093 photosystem I subunit K
24.1247 Ahg489877 light harvesting complex of photosystem II 5
24.4336 Ahg894258 DOMAIN OF UNKNOWN FUNCTION 724 8
30.5941 Ahg485048 plastid transcriptionally active 16
32.311 Ahg936430
33.7639 Ahg484073 GRAS family transcription factor family protein
35.242 Ahg922886
37.4166 Ahg945228 Tetratricopeptide repeat (TPR)-like superfamily protein
38.1051 Ahg471443 glyceraldehyde 3-phosphate dehydrogenase A subunit 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression