Detail



ID : Ahg497397

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|497397|fgenesh2_kg.343__1__AT4G31560.1
Sequence
AAAAATAATG GCGAGACTTT TCGTCTCTAT CCTTATGCAA CCCACACAGA TAAGCTTCTC TGCGTCTTCT TCTCAGCCAC TATTCTCGCC GCCGGCGAAC AATTTTCCCG ATGGTGTAGC CGGAGGATTA TGTCTTACAC GGAGAATCAG AGACTGTTCC GTGGTGACGC GAGCAGGGCC TAGTACGAGC AGCTACTTGC TCGCGTTCGC CATTCCTGCT ACTCTTATCG CCGCCACTGT CTTCACTTCA ATCAAAATCG CTGATAAACT CGACGAAGAT TTCCTTGAGG ATATTGCGTT GAACCAAGCG ATAAAAGCAG CAGAAAAGGG AGAGAATGGT GAAGGGGAAA TCTCACTGGA TGATGTGATT CAAGAACCTG TGCTTCAACG AACTCGTAAT CGGCCTAAAC GTGAAGTTTA GAAACGCGCA CACAGATTCT TCAATACATG TTGTGTTTTG TATAAGAAAA TGTAAGCTTG TAGCCTTCCT AGTCCCGTTT ATAGTTGTAG TTACTGGTCA TATTACATTA CCGTTTGATC ATTTTGTAAA GAAAAAACGG ATGATGAATC AAAAACCTCG TTACATTTA 
Length589
Protein Sequence
Protein Residue
Map Locationscaffold_4: 11385449.. 11385741
Download Sequence
A.thaliana
AGI-codeAT4G31560.1
Descriptionhigh chlorophyll fluorescence 153
TAIR curator summaryEncodes HCF153, a 15-KDa protein involved in the biogenesis of the cytochrome b(6)f complex. Associated with the thylakoid membrane.
Alias[HCF153][high chlorophyll fluorescence 153]
Gene coexpression
MR
MR Locus Description
9.38083 Ahg487264 pentatricopeptide (PPR) repeat-containing protein
13.4164 Ahg470757 CCCH-type zinc fingerfamily protein with RNA-binding domain
14.4914 Ahg494796 Insulinase (Peptidase family M16) family protein
18.9737 Ahg920110 MBOAT (membrane bound O-acyl transferase) family protein
27 Ahg482018 FtsH extracellular protease family
29.3939 Ahg480047 Rhodanese/Cell cycle control phosphatase superfamily protein
32.1714 Ahg477305 DEAD/DEAH box helicase, putative
32.619 Ahg482988 Radical SAM superfamily protein
34.2491 Ahg931790 coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative
35.8887 Ahg474076 cytochrome c biogenesis protein family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression