Detail



ID : Ahg471392

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471392|fgenesh2_kg.1__1346__AT1G12420.1
Sequence
TGGAAGGATT ATGTGAAAGC GTGCTTTGTC TATCATCTAG AGAGAGAGAG AGAAAAAGTA ACAGTTTTTC GGAGCAATAA AAACGGCACC GTTCATTTAG AGAGAAACGC TGGTGAATAG ATTTTAGATG TGTTAGAAGA CGAAGAAGAA CCAGAGGTTG AAAACGACGG CGTATTAGTT TGTATTAGAG ATGGCGATGA AGGGTTATTT GGATGAGTAT GAAAAGCTTG TTATTAGGAT GAACACTCCG AGGGTCGTTA TCGACAATGG TGTTTGTTCT TCAGCGACAA TCGTCAAGGT TGATAGTTCA AGAAGAAATG GGATACTGTT AGAAGCTGTA CAAATTCTCA CAGATTTGAA TCTCTCCATT AAAAAAGCTT ACATTTCTTC TGATGGAAGA TGGAACATGG ATGTTTTTCA TGTGACTGAC TTAAACGGAA ACAAATTGAA TGACCAGAGC GTCTTGAGAT ACATTGAACA GTCGATTGAG ACGGTTTACT ATGGAGAAAA CATTGAAGTA AACTGTTTAA CAGCTTTAGA GTTAACCGGA ACAGACCGAA TCGGTTTACT GTCTGAGATG TTTGCGGTTC TCTCTGATCT CAACTGTGAT GTGGTTGACG CTAAGCTATG GACACATAAT GGTAGAGTTG CTTCTGTGAT CTATCTCAGA GATGGTAGCT CTGGAGCTCC GATTCTTGAT TCTCAACGGA TATCAAAGAT CGAGGGACGG TTAAAGAACG TTTTGAATGG TGATAACGAT GTTAACTCTG CTGCAAAGAC TTGTGTTTCT GTGGATTCGA TGATGCACAT AGAACGTAGA CTTCATCAGC TAATGTTTGA AGATAGAGAC TATGAGAGGA GATCCAATAA ACAGGAGAGA TCTCCAACGG TGGTTGTGAC GGTTCAGAAT TGGGCTGAGA GGAGTTACTC TGTCGTTAAT GTTCATTGTC GGGACCGGAC CAAGCTTCTA TTCGATGTGG TTTGTACGTT AACCGATATG GAATATGCCG TGTTCCACGC TACTATCAAC ACGGCTGAAG ACCAAGCTCA CTTGGAATTC TATATCCGGC ATAAAGATGG ATCACCGATA AGTTCGGAGG CAGAGAGGCA ACGAGTGATT TTATGCTTAG AAGCTGCAGT CGAAAGAAGA GCACTAGAGG GAGTGAGATT AGAGCTGAGG CATCCGGACA AACAAGGCTT ACTAGCTGAA GTAACTCGGA CATTCAGAGA AAACGGTCTG AATGTTACAA GAACAGAGAT ATCAACGAGT AGCGAGATGG CTACAAACAT ATTCTATGTA ACTGATGCAA ATGGAGACGA ACCAGACTTC AAATTGATTG AATCGGTTAG GGAGAAAATC GGTTTGGAGT GTTTAAGAGT GAAGGAAATG CCAACAATGA ATCATAAGAA GGGAGATGGA GAAGAACAAC AGACCAAAGC AGTGTTGGTT TCACTTGGGA GTTTGGTTTG GAGAAATCTA TTCAACTTTG GTCTTATCAA ATCATGTTCT TAAATCATTC AAATCTTTGG TTAACCGAAC CACGATGAAA TTCATCCTTT GAGAGGCACG CGGACTTTGT TTAAGAAGTC TGCGTGCCTT AGAAAGGATA AACTTTTTTA TCGGTGTGGT TGGTAGGTTA AATTTTAAGT TAGGTGATGG TTTGGTCATG TCATGTTATT GTAAATAGAG AAAAAGAGGA GAGGGATGAT TAGAAATTCA GAAATTGCTT ACTTTTTTTT CTTTTTTTAT TGTGGGGTTT TAGATGATAG AAGAGGTTGT ACAAAAGTTT CTAAGATTAA TTATT 
Length1805
Protein Sequence
Protein Residue
Map Locationscaffold_1: 4797817.. 4800616
Download Sequence
A.thaliana
AGI-codeAT1G12420.1
DescriptionACT domain repeat 8
TAIR curator summary
Alias[ACR8][ACT domain repeat 8]
Gene coexpression
MR
MR Locus Description
7.2111 Ahg949673 DEAD-box protein abstrakt, putative
12.6095 Ahg496423 myb domain protein 96
13.8564 Ahg485364 myb domain protein 77
20.3961 Ahg345641 Mitochondrial ATP synthase D chain-related protein
25.0599 Ahg471206 alpha/beta-Hydrolases superfamily protein
27.9643 Ahg946362 F-box family protein
28.9828 Ahg948460 decapping 5-like
35.6511 Ahg483768 Fatty acid/sphingolipid desaturase
36.0832 Ahg473458
38.9487 Ahg492995 Protein of unknown function (DUF688)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression