Detail



ID : Ahg471532

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471532|fgenesh2_kg.1__1486__AT1G13730.1
Sequence
GAAATTTCCC TCCTTACCAT AAATAATAAT CAAAAATCCC AATTTCTTCT CGTCGGAGAT TTCTAAGTAA AACCCTAGAA CTAACCATTA TATATAAATA TATATTCATC CCTCCCCTGT CTCCTACTTT GTCTTCTCTT CGAACTCATC TGAGATTCTT GATTCTGCTT CTCTTCTTAT CTTCTCCCTA GGTAGAGATG GCACTTGAAT CAAATGCTCC TGTGGTGGAT CCAAACACTA TTGGCAATTC GTTTGTTGAG CAGTACTACA ACCTCTTGTA TAAGTCACCA GCTGTAGTGC ATCAGTTTTA TCTCGACGAT AGTGTTTTGG GCCGCCCCGG TGCTGATGGA GAGATGGTTT CCGTCAAATC CTTAAAAGCT ATCAATGAGC AGATTATGTC CTTTGATTAC AAAATCTCAA AGATTCAGAT TTTGACTGCT GATTCCCAAG CATCTTACAA GAATGGAGTT GTGACTCTAG TCACGGGTTT ACTGACCGTG AAAGAAGGGG AGAGAATGAG ATTTTCTCAA TCGTTTTTCC TTGTGCCGCA TAATGGAAGC TACTTCGTGC TGAACGATGT CTTTAGGTAT GTTGCTGATG AGATTGTTGA ACCAGAAGCT AACAAGAAAG AGGTCGAGGA GGTGATTCCT CAAATGGTCC AATCAACAGT CACTATTTTG GCAGAGCCGG CGAATGAAGT TGCAGAGCCA GTTACTATCC CTAGTCAACA ACCCGCGGCA AAACAGACTA CTGAAAATAT AGTGAAGAAA CCAGAAAGAG CTGTAGCAAA TGGACACCCC AAAACCCAGG AGGAAAAAGT TGTGAACGAT AAAAGCAATG CTGTGGATGC TCCCAAGAAA TCATATGCAG GAATTGTTCA ATCTTTGGCT CAAAACGGTG CTACATTCAA TGTCAAAGCT CCTCCTGCAA AGCCTAAGTC TAAGCCTGTT ACAAAGCCGA GTGCTGCTCC TGAATCCAAA GCTCCTTCGC CGGTTTCTGA ACACTCTTCT GCTGAAACAG TCGACCAACC AGGTTGTACG ATATTTGTTG CCAACTTGCC CATGGACGCG ACACCAGAGC AACTCAATGA AACCTTCAAA GGTTTTGGAT CTATTACGAA AGATGGTATC CAAGTGAGAA GTTACAGGCT GAAGGGAAAC TGTTTCGGGT TTGTGACATT CGAATCGGCT GAAGCTGTGA AATTGGTCCT CCAGGCTCAC AAAGGCTTAG CCATCAGAAT CGGAAACCGC AAAGTTTCAA TAGAAGAGAA ACGAGGCAAC AACGATAATG GAAGACCCTC AACGCGAAAT GGAGGTTATA GGAACGAGAA CGGTTACAGA AACGATGGGG TTAGGCCTAG AGGCAACGGT TTCAATGGAG GTCGAGGCCA TGGAAGAAAT GGATCCGAGA GACGGGGTGA ATCACGCAAC GGTGAGGCTT ACAATGGTGA TGGCAAAGTT CATCAGAACG GTACGGTAAA AGCTGGCCGT GAAAATGCTC AATCCAGAGG CTAAACAAGT TTGAAGTCAT TTTCTTAAAC TCTGATGTGT TCTTATTGTT CATTTGAAAA TGAGAATCTG AAGTTTTATA GGAAGAGATA GTGAGAGGGA CAGAGAGAGA GAGAGATTAG AAGTTCTTTT GGAGTAGGTT TATCTCTTTA GGTGATAATC CCTTCTTTCA TTTGAGATTT TGTTTGGGAT AACAAAAATT TGATGATTAC TTTTACTTTC 
Length1730
Protein Sequence
Protein Residue
Map Locationscaffold_1: 5508044.. 5510751
Download Sequence
A.thaliana
AGI-codeAT1G13730.1
DescriptionNuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.32456 Ahg486909 BRCA2-like B
15.2315 Ahg483041 Ribosomal protein L10 family protein
19.6977 Ahg492264 fibrillarin 2
26.4386 Ahg923403 poly(A) binding protein 8
28.9828 Ahg470810 ribosomal protein S15A
29.5973 Ahg917116 myosin 2
36.7423 Ahg940355 DEA(D/H)-box RNA helicase family protein
40.9145 Ahg485949 ribosomal protein L23AB
42.0714 Ahg949127 Zinc-binding ribosomal protein family protein
42.4853 Ahg903199 HSP20-like chaperones superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression