Detail



ID : Ahg471821

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471821|fgenesh2_kg.1__1775__AT1G16240.3
Sequence
AAACAGCGTC GTTTTATTTC AGCTTCATCT TTACGGTGCG TGACAGGTCG ACTCATTCTC CTCCGATTCA CGGTGGCTCC GGCGAATACA GAGTCAACGT TCAATAAGCC GATCTGTTAC ACAAAGGTCC GAGGAATAAT TTGGGATAAT GGCGTCTTCG TCGGATTCAT GGATGAGAGA ATACAACGAT GCTTTAAAAC TCTCTGAGGA GATTAATGGA ATGATATCAG AAAGAAGTTC ATCGGCTGTC ACAGGGCCTG ATGCTCAGCG TCGTGCTTCA GCTATACGAA GGAAGATCAC CATTTTCGGT ACCCGATTAG ACAGTCTGCA GTCTCTTCTT GCTCAAATTC ATGGAAAACC TATTTCTGAG AAAGAGATGA ATCGGCGCAA GGATATGGTA GGGAATTTGA GATCAAAAGC AAACCAGATG GCGAATGCTT TGAACATGTC AAACTTTGCC AATAGAGACA GCTTGCTTGG GCCAGAAATA AAGCCGGATG ATTCCATGAG CAGAGTTACT GGCATGGATA ACCAGGGAAT TGTTGGTTAT CAACGACAAG TTATGAGAGA ACAAGACGAA GGACTTGAGC AATTGGAGGG AACAGTCATG AGCACAAAAC ACATTGCTCT GGCTGTTAGT GAAGAGCTTA ACTTGCAGAC AAGGCTTATT GATGACTTAG ATTACCATGT GGATGTCACT GACTCTCGCT TACGGAGTGC AGAAGAGCCT TGCTGTCATG AACAAGAATA TGAGAAGTGG TTGCTCTTGC ATGTCAATGC TCTTGTCAGT GCTGGGGATT GTCGGTCTTG CTGTTGTAAT ATGGATGTTG GTTAAGTATC TGTAATACCA ACATCAGAAA ACTTATAAGT TTCTCTGTAG GTCACTGTCA CTGGCCTCTA CTCTCTATGT GAATGGTTGC AATGTATTTT CCTCATTCCA CATTTGTGGT TGAGCTTTTC ATTTCTCTTC TGTTACAAGA ACCCTTAAAG TATTATATAA TGTGTGCAGT TTTCACAGTT TGCT 
Length1024
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6500134.. 6501994
Download Sequence
A.thaliana
AGI-codeAT1G16240.1
Descriptionsyntaxin of plants 51
TAIR curator summaryEncodes one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed.
Alias[ATSYP51][SYP51][syntaxin of plants 51]
Gene coexpression
MR
MR Locus Description
8.12404 Ahg474726 NIMA-related serine/threonine kinase 1
11.6619 Ahg349878 sorting nexin 1
13.6382 Ahg496503 MA3 domain-containing protein
13.9284 Ahg318458 calmodulin binding;transcription regulators
15 Ahg479273 tetraticopeptide domain-containing thioredoxin
17.2337 Ahg473046 dormancy-associated protein-like 1
21.7256 Ahg471776
23.8118 Ahg927086 F-box family protein
23.8747 Ahg358984 NSP (nuclear shuttle protein)-interacting GTPase
24.8193 Ahg481510 Xanthine/uracil permease family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression