Detail



ID : Ahg923954

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|923954|scaffold_105235.1
Sequence
CACCCTCAAG AGTCACCGAC ATGTGTGGAG GAGCTATAAT CTCCGATTTC ATTCCACCGC CGAGGTCTCG CCGTGTTACC AGCGAGTTTA TTTGGCCGGA TCTGAAGAAA AGCTCGAAGA ATCGTTCGAA TTTCTTTGAT TTTGACGCTG AGTTCGAGGC TGATTTCCAA GGTTTCAAAG ATGATTCTTC TATTGATTGC GACGATGATT TCGATGTCGG TGATGTTTCC GCCGATGTGA AACCATTCGT TTTCACTTCG ACTCCGAAAC CCGCCGTCGA AGGTTCAGCT TTTGGTAAGA AAGTTGATGG GGAAGCTGAG AAATCTGGAA AGAGGAAGAG GAAGAATCAG TACCGAGGGA TTAGGCAACG TCCTTGGGGC AAATGGGCTG CTGAGATACG TGATCCAAGA GAAGGTGCTA GAATCTGGCT TGGAACTTTC AAGACAGCTG AGGAAGCTGC TAGAGCTTAC GATGCTGCAG CGCGGAGGAT CCGTGGATCT AAAGCTAAGG TGAATTTCCC TGAGGAAAAC CCCAAGGCTA GTTCTCAGAA ACGCTCTGTG AAGGCTAATC TTCAGAAACC TGTGGCTAAA CCTAACCCAA ACCCAAGTCC TGCTTTGGTT CAGAACCTGA ACAACTCCTT TGACAATATG TGTTTCATGG AGGAGGAGAA ACACCAACAA GTGAACAACA ACAGCAATCA GTTTGGGTTG ACAAACTCCG TTGATGCTGG ATGTAACGGG TATCAGTATT TCAGCTCAGA CCAGGGTAGT AATTCGTTCG ATTGTTCTGA GTTTGGTTGG AGCGATCAAG CTCCAATAAC TCCCGACATC TCTTCTGCGC TTATCAACAG CAACGACTCA GGTCTATTCT TTGAGGAAGC CAATCCAGCT AAGAAGCTCA AGTCTATGGA TTTCGAGACA CCTTACAACA ACACTGAATG GGACGCTTCA CTGGATTTCC TCAACGAAGA TGCTGTAACG ACTCAGGACA ATTGTGCAAA CCCTATGGAC TTATGGAGCA TTGATGAGAT TCATTCCATG ATCGGAGGAG TCTTCTGAAG AGATCCATTT TCAAGTAA 
Length1078
Protein Sequence
Protein Residue
Map Locationscaffold_1: 27445460.. 27446814
Download Sequence
A.thaliana
AGI-codeAT1G53910.1
Descriptionrelated to AP2 12
TAIR curator summaryencodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.12). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.
Alias[RAP2.12][related to AP2 12]
Gene coexpression
MR
MR Locus Description
4.24264 Ahg923937 regulatory particle triple-A 1A
4.3589 Ahg474459 phosphoenolpyruvate carboxylase 1
5.65685 Ahg939446 transducin family protein / WD-40 repeat family protein
6.40312 Ahg494959 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase
7 Ahg488313 Protein kinase superfamily protein
7.34847 Ahg472346 DNAJ heat shock N-terminal domain-containing protein
7.74597 Ahg924165 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein
8.94427 Ahg489218 XS domain-containing protein / XS zinc finger domain-containing protein-related
9.16515 Ahg479029 phospholipase D alpha 1
9.53939 Ahg472400 Calcium-binding EF hand family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression