Detail


ID : Ahg470899

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470899|fgenesh2_kg.1__853__AT1G08380.1
Sequence
AATAAAAATC TATTTCTTGC GTTTGTGTTT GTGTTAAAAA TAAAGGAGAT CAGTTTGGGA GAAAGAAGCA AAGAACAAAA AAATGGCAGC AACATTTGCA ACACCATCGA CGGTGATAGG CCTCGGAGGA TCATCCATCA CCACCAAACC CTTCTCTTCA TCCTTTCTAA AACCAACATT AAGCGCCAAG AACCCTCTAA GACTCGCCGG GGCATCGGGT GGAAGAGTCA CTTGCTTTGA GAGGAACTGG TTGAGGAGAG ATTTGAACGT GGTGGGATTT GGGCTGATCG GATGGCTAGC TCCGTCGAGT ATTCCAGCGA TAAACGGGAA GAGCCTGACG GGTCTCTTCT TCGATAGCAT AGGAACTGAG CTGGCTCACT TCCCAACTCC TCCAGCCGTC ACTTCACAGT TCTGGTTGTG GTTGGTTACG TGGCACTTAG GCCTCTTCCT CTGCCTCACT TTCGGACAAA TCGGATTCAA GGGCAGGACT GAGGATTACT TCTAAGGATA ACTATTCCTC TTCCATTTGT ACTATATGTT CTCTCTCTTG GTTATGTGTA ATGTTATCAA ATCAAACCAA AGCTTTCTTT GCTATTTGAT GTTTCATTCT ATATATCGAC TAGTCTTTCG TAATGATCTT GCTTTTAAAA ATGTCGTCAG TCTAACTAAA GTGTAAAATG TTAAA
Length685
Protein Sequence
Protein Residue
Map Locationscaffold_1: 2984635.. 2985581
Download Sequence
A.thaliana
AGI-codeAT1G08380.1
Descriptionphotosystem I subunit O
TAIR curator summaryEncodes subunit O of photosystem I.
Alias[PSAO][photosystem I subunit O]
Gene coexpression
MR
MR Locus Description
1 Ahg922093 photosystem I subunit K
2.82843 Ahg486624 photosystem I light harvesting complex gene 2
3.87298 Ahg471781 light harvesting complex photosystem II subunit 6
4.3589 Ahg477073 photosystem II subunit R
6.9282 Ahg486922 light harvesting complex photosystem II
6.9282 Ahg933558 photosystem II reaction center W
8.83176 Ahg485905 photosystem I light harvesting complex gene 1
8.94427 Ahg489877 light harvesting complex of photosystem II 5
9.27362 Ahg472829 B-box type zinc finger protein with CCT domain
9.79796 Ahg496598 photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression