| Annotation |
|---|
| Description | jgi|Araly1|473044|fgenesh2_kg.1__2998__AT1G28320.1 |
| Sequence |
CCCGAAAACT AAAAAGATCC AAACTTCTGC AATTTTGGTG TCTGCTATAC AGAATCCAAA TCCACCATCT TCCGATTGAA AACGCCTTCT CTTTCGATCA TGGATGTGTC GAAAGTCGTC AGCTTTTCCC GGAATTTCGC CGTCTTGGTC AAAGTCGAAG GCCCTGATCC AAAGGGATTG AAGATGAGGA AGCATGCTTT TCATCAATAC CATTCTGGCA ATGCAACACT TTCAGCTTCT GGGATCTTGT TTCCAAGAAA TATCTTCAGT GGTGGTGAGG TCACGGCTAA GGTTCTGTTT GAAGCTGGTC AGGACATGGC CCTGGTTTTG ACTGTTGCAT CTGTTGTAGA GCCATTCTTA ACATTAGGTC ACAGAACTAG TAGTAGTATC TCTCAGGATC CGGTGAAGCT TATTCCGGGT GCTCGGATTG AGATTATGGT GGAGGGTCAG CTAAAGTCAG GAAAGGAAGC TCCTTTTTGG GTTCCTGCGC AACTTCTTTC GCTGGTTGAT GTCCCTGTAT CTTCTGCTGC ACTCCAATCT CTTATTGAAG CTTCTTCCGG TTCGAAAGAT TCTGGATGGG ATGTTGGTTG GTCTTTGGTT TCTGCTGCTA ATGGTTCTCA GCCTTCAACC AATATTGAAC ATTACAGAAA GCCCTTGATG CAACTTGATG AGCCACTCAA TGCTAACTTC ATGGCCAAGT CTGCCACTCG AATGGCTCTT CTAGGAGTCC CCTTAAGTTT ACTGGGTCAG CCAAACATGA ATTTTGCTTC ATCAAGTAGC AAGGGTGATA CACTTGTAGC ACTAGGTTCT CCTTTTGGAA TCCTTTCACC TGTTAACTTT TTTAACAGTG TATCAACTGG TTCCATTGCG AATTGCTATC CTTCTGGATC CCTAAAGAAG TCACTGATGA TAGCTGATGT TCGATGTCTC CCTGGAATGG AAGGGGCTCC GGTGTTTGAT AAGAATGGGC ACTTAATTGG CATTTTGATT AGACCACTAA GGCAAAAGAA TAGCGGCGTT GAAATTCAGC TGGTGGTTCC ATGGGGAGCA ATCACAACTG CTTGCAGCCA CTTGCTGCTT GAGGAACCAT CTGAAGCAGG AAAAGCAAGT CAGTGGGGGA GTGAAGCACT AAATGTTAAA TCAGATACTA GTATTCCTGC ACAAGTGGCT ATTGAGAAGG CGATGGAATC AGTTTGTCTT ATTACAGTCA ATGATGGTGT TTGGGCATCT GGTATTATTC TTAACGAACA TGGTCTCATA CTAACAAATG CTCACCTGCT TGAGCCGTGG AGGTATGGAA AAGGTGGTGT ATATGGTGAA GGAAACGACG CTGGTTTAAA ACCCTATGTC TTAGGAGCCG AGGAGTTTTC TTCCACGGGA GGTAAAGTTT GGGAACAGAA GAGTCAAACA TTGCCACGGA AAGCTCCAGC AAATCTTTAT TCGTCTGTTG GAGAGAACAT TAGGGAATAC AAACACAATT TCCTTCAGAC TGGGCATAGA GATATACGTG TACGATTGTG TCACCTAGAT TCTTGGACTT GGTGTACTGC AAACGTGGTC TATATTTGCA AGGAACAATT AGATATTGCT TTACTGCAGC TAGAATATGT CCCTGGAAAG CTCCAACCTA TTGCTGCCAA TTTTTCTTCT CCTCCTTTGG GTACAACAGC GCATGTTGTT GGACATGGAC TCTTCGGACC AAGATGTGGG CTTTCTCCTT CTATTTGTTC TGGAGTTGTA GCAAAGGTAG TTTACGCGAA GAGGAGATTG AATACGCAAT CCATTTTGCA AGAAGTCGCA GAGTTCCCCG CTATGCTCGA AACAACAGCT GCTGTGCATC CTGGTGGTAG TGGTGGTGCT GTTCTCAATT CAAGTGGCCA TATGATTGGA CTTGTTACCA GCAACGCAAG ACATGGAGCG GGGACTGTTA TACCGCATCT CAACTTCAGC ATCCCATGTG CAGTCTTGGC ACCAATCTTC AAGTTTGCAG AAGATATGCA GAACATAAAG CTCCTTCAAA CACTTGATCA ACCAAGCGAA GAACTCTCAT CCATTTGGGC TTTGATGCCA TCACTATCAC CAAAGACTGA GCAGTCTCTA CCCAATCTAC CTAAGTTACT CAAAGATGGT AATAACAAAC AAAAGAAAGG ATCTCAGTTT GCCAAGTTCA TTGCAGAGAC CCAAGACATG TTTGTAAAGC CGACCAAGCT TTCCCGTGAT GTGATCCCTA GCAAGTTATG ACAAGATTGG CTTCTTTGCA GAGTGTGCGC CTTCTTTTCC CCCTTTTGCT GGAGTGGCAA CTTTAACTTT TGTATAGATA GAGAGATTAC AATGTGTTGC TGCTGTTTCT GGATTCTTCT GCTTGTAACA TATGTAAAAC CTTATA |
| Length | 2386 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 11858886.. 11862970 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G28320.1 |
| Description | protease-related |
| TAIR curator summary | Mutants in this gene are defective in the processing of pre-glyoxysomal malate dehydrogenase (pre-gMDH) to gMDH. |
| Alias | [DEG15][degradation of periplasmic proteins 15] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.47723 |
Ahg484347 | Protein kinase superfamily protein |
| 6.48074 |
Ahg487938 | KNOTTED1-like homeobox gene 4 |
| 8.12404 |
Ahg945962 | calcium-dependent protein kinase 15 |
| 8.544 |
Ahg890516 | peptidyl-prolyl cis-trans isomerases |
| 9.48683 |
Ahg485377 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| 11.5758 |
Ahg488853 | Protein of unknown function, DUF538 |
| 13.0384 |
Ahg350108 | |
| 13.8564 |
Ahg472032 | Protein kinase superfamily protein |
| 21.4942 |
Ahg940302 | small RNA degrading nuclease 2 |
| 22.4499 |
Ahg490906 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|