| Annotation |
|---|
| Description | jgi|Araly1|487938|fgenesh2_kg.6__1072__AT5G11060.1 |
| Sequence |
AAGAAGAATA AATATAGGAA TAAATCGTCT TTTTGGTGTA AGCTACATAT AAAATTCAAA CGTTCAAACA CATACACATC GAAACCCTTA TATTTCATTT TCTTTCTTTT TAAAGAAGAA AGTTTCTATA ATTGATTGAT AAATCTGAAC ATCAAAGCTA AGAATTTCTC TTCACGAAAA CGATGGCGTT TCATAACAAT CACTTTAATC ACTTCACCGA CCAACAACAA CACCAGCCTT CTCCTCCTCC GCCACCGTCA CAGCAGCAAC AACAACAACA TTTTCATGAA TCAGCTCCGC CTAATTGGCT CCTCCGCTCC GATAACAATT TCCTCAACCT CCACACCGCC GCTACAAGCT CCGATTCTCC TTCTTCCGCC GCCGCTAACC AGTGGCTCTC ACGATCCTCA TCCTTCCTCC AACGCGGCGG AACAGCAAAC AACAACAACG AAACATCCGG TGACGTCATC GAAGACGTCG CCGGCGGAGA GGAGTCAACG ATCGGAGAGA AGAAGGAGGC GGAGAGGTGG CAGAATGCGA GACACAAGGC GGAGATACTG TCTCATCCAC TCTACGAGCA GCTTTTGTCG GCACACGTGG CGTGCCTGAG GATCGCAACG CCGGTGGATC AGCTTCCGAG GATTGACGCA CAGCTTGCTC AGTCGCAAAA CGTCGTGGCT AAGTACTCAA CCTTAGAAGC CGCTCAAGGA CTCCTCGCCG GCGATGACAA GGAGCTTGAC CACTTCATGA CGCATTATGT ACTATTGCTT TGCTCTTTCA AAGAACAATT GCAACAGCAT GTTCGAGTTC ATGCAATGGA AGCTGTTATG GCCTGTTGGG AGATTGAGCA GTCTCTTCAA AGTTTTACAG GAGTATCTCC TGGTGAAGGC ACAGGAGCAA CAATGTCTGA GGATGAAGAT GAGCAAGTAG AGAGTGATGC TCCTTTGTTT GATGGAAGCT TAGATGGTTT AGGGTTTGGT CCTCTAGTTC CCACTGAGAG TGAGAGATCT TTGATGGAAC GAGTCAGACA AGAACTTAAA CATGAACTCA AGCAGGGTTA TAAGGAGAAA ATTGTGGACA TAAGAGAGGA GATACTGAGG AAGAGAAGAG CTGGAAAATT ACCAGGAGAT ACCACCTCTG TTCTCAAAGC ATGGTGGCAA TCTCATTCTA AGTGGCCTTA CCCTACTGAG GAAGATAAGG CGAGGTTGGT GCAGGAGACA GGTTTGCAGC TCAAACAGAT AAACAATTGG TTCATCAACC AAAGGAAGAG GAACTGGCAT AGCAATCCAT CTTCTTCTAC CGTCTCAAAG AACAAACGCA GAAGCAATGC AGGTGAAAAT AGCGGAAGAG AGCGTTGAGG TCACTTTGAA GCTCGCATGG AGAGATCCAA AAGCTTAATA GAAAATTGGA GACATCATGA AGACAAGAAT TCTTACACAA CAAACTTAGA ACGTAATTTT TGTGTCATTA CATGGTATGA CTTCCATAGT TCGTAATGAT TAGGGAACAC ACCAAGCCCC AAAGTATGAT TTGTAATATG AGGTTTTAGA TGGACTACTT TATGATAGGA TCGTCAGTCG TCGTCACTGC CATCTCCACC ATCAATCCAT CATTATATCT TGTGAATAAC ATGGAGATTT CTCGTTATAG CATTTGTGCA ATCATTGGCC GTAATCTACA CAAATATGCA TAT |
| Length | 1693 |
| Protein Sequence | |
| Protein Residue | |
| A.thaliana |
|---|
| AGI-code | AT5G11060.1 |
| Description | KNOTTED1-like homeobox gene 4 |
| TAIR curator summary | A member of Class II KN1-like homeodomain transcription factors (together with KNAT3 and KNAT5), with greatest homology to the maize knox1 homeobox protein. Expression regulated by light. Detected in all tissues examined, but most prominent in leaves and young siliques. Transient expression of GFP translational fusion protein suggests bipartite localization in nucleus and cytoplasm. KNAT4 promoter activity showed cell-type specific pattern along longitudinal root axis; GUS expression pattern started at the elongation zone, predominantly in the phloem and pericycle cells, extending to endodermis toward the base of the root. |
| Alias | [KNAT4][KNOTTED1-like homeobox gene 4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.48074 |
Ahg473044 | protease-related |
| 8.7178 |
Ahg480822 | heavy metal atpase 4 |
| 14.9666 |
Ahg921319 | T-complex protein 11 |
| 23.9165 |
Ahg486874 | Leucine-rich repeat protein kinase family protein |
| 23.9792 |
Ahg490616 | Protein phosphatase 2C family protein |
| 30.4631 |
Ahg476684 | bifunctional nuclease in basal defense response 1 |
| 34.4674 |
Ahg927489 | |
| 35.9166 |
Ahg490677 | Papain family cysteine protease |
| 36.7423 |
Ahg481564 | DNAJ heat shock N-terminal domain-containing protein |
| 42.0595 |
Ahg474784 | Dormancy/auxin associated family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|